RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RIMKLAQ8IXN7 391 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 OR5AN1Q8NGI8 311 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 ALG14Q96F25 216 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 ABCA7Q8IZY2 2146 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 TCRBV5S2A0A599 114 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 C1QL3Q5VWW1 255 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 SLC25A28Q96A46 364 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 TLNRD1Q9H1K6 362 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 H3BQ15 152 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 ATP5LO75964 103 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 CISD3P0C7P0 127 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 TMEM95Q3KNT9 176 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF506Q5JVG8 444 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 PRADC1Q9BSG0 188 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 SCN5AQ14524 2016 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 CT62P0C5K7 136 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF385CQ66K41 422 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-209ENST00000635750 CBLN3Q6UW01 205 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF818PQ6ZRF7 136 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 ATG4DQ86TL0 474 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-209ENST00000635750 RTN4RL2Q86UN3 420 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 NEUROG1Q92886 237 aa4.79□□□□□ -1.64
SCN1A-209ENST00000635750 COLQQ9Y215 455 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-209ENST00000635750 QSER1Q2KHR3 1735 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 PROB1E7EW31 1015 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 OR2H2O95918 312 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 SAA1P0DJI8 122 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 DRD3P35462 400 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 GZMKP49863 264 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF146Q15072 292 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 LYZL2Q7Z4W2 148 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 SELENOHQ8IZQ5 122 aaKnown RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 LINC01555Q8NAE3 123 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 COX14Q96I36 57 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 FAM60AQ9NP50 221 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 PATJQ8NI35 1801 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 NPIPB4C9JG80 1138 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 M0R381 172 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 HYAL3O43820 417 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 NAPSAO96009 420 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 PTGDSP41222 190 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 OR8D4Q8NGM9 314 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 CXCL16Q9H2A7 254 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 LAMB2P55268 1798 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 ODAMA1E959 279 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF729A6NN14 1252 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 RRHO14718 337 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 CD300LDQ6UXZ3 194 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 OR11H1Q8NG94 326 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 OR11H2Q8NH07 326 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 MRM2Q9UI43 246 aaKnown RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 CRHP06850 196 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 C8orf88P0DMB2 117 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 UCP3P55916 312 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 OR11H4Q8NGC9 324 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 SCGB3A1Q96QR1 104 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 SLC25A15Q9Y619 301 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 MOSPD3O75425 235 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 NDUFB4O95168 129 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 ASCL4Q6XD76 172 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 OR5A1Q8NGJ0 315 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF703Q9H7S9 590 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 AHDC1Q5TGY3 1603 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 DOCK11Q5JSL3 2073 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 TRBV9A0A0B4J1U6 114 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 C19orf67A6NJJ6 358 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 HOXB3P14651 431 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 MVDP53602 400 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 LINC01560Q8TB33 94 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 RNF133Q8WVZ7 376 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 SHISA4Q96DD7 197 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 WDR34Q96EX3 536 aa4.78□□□□□ -1.64
SCN1A-209ENST00000635750 COL11A1P12107 1806 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-209ENST00000635750 ADARB2-AS1A8MUL3 147 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 FAM27BQ5VT28 67 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 FAM71F2Q6NXP2 309 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 WDR82Q6UXN9 313 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 PPP1R27Q86WC6 154 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 RNF182Q8N6D2 247 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 SLC25A2Q9BXI2 301 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 WNT10AQ9GZT5 417 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 TCF21O43680 179 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 DUSP14O95147 198 aaKnown RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 SNRPCP09234 159 aaKnown RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 SP9P0CG40 484 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 LTBRP36941 435 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 CRYBB2P43320 205 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 COLCA1Q6ZS62 124 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 C3orf56Q8N813 242 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 TMEM54Q969K7 222 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 HSPB9Q9BQS6 159 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 NPIPB8E9PQR5 432 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 NPIPB9F8W1W9 429 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 NPIPB7O75200 414 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 SOD3P08294 240 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ARL14EPLP0DKL9 152 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms