RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 CDC42BPAQ5VT25 1732 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 APOOLQ6UXV4 268 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 PRSS48Q7RTY5 328 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF695Q8IW36 515 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 GAPTQ8N292 157 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 SUMF2Q8NBJ7 301 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 OR8D4Q8NGM9 314 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 FNDC9Q8TBE3 224 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 OR51E1Q8TCB6 317 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 NT5CQ8TCD5 201 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 NUP210Q8TEM1 1887 aaPredicted RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 IL1F10Q8WWZ1 152 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM131Q92545 1883 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM54Q969K7 222 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 MRPS24Q96EL2 167 aaKnown RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TEX37Q96LM6 180 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 C9orf85Q96MD7 179 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 NRTNQ99748 197 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 SLC25A31Q9H0C2 315 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM222Q9H0R3 208 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 LIME1Q9H400 295 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TRPM3Q9HCF6 1732 aaPredicted RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 BET1LQ9NYM9 111 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 OR5AC2Q9NZP5 309 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 MMP17Q9ULZ9 603 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 UBIAD1Q9Y5Z9 338 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 SCN4AP35499 1836 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 PARP14Q460N5 1801 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 ROBO3Q96MS0 1386 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 MYH8P13535 1937 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 PRRC2AP48634 2157 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CHD3Q12873 2000 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 DOCK5Q9H7D0 1870 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 DIP2AQ14689 1571 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 NRKQ7Z2Y5 1582 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 SCN10AQ9Y5Y9 1956 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ABCC5O15440 1437 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 IGLV3-22A0A075B6J6 115 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 A0A0A6YYD4 124 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 A0A1B0GWB2 263 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 A0A1W2PNU3 283 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 A0A1W2PRS3 328 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 C7orf71A4D174 169 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM212A6NML5 194 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 K7EMT4 169 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 MYL12BO14950 172 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ARL6IP5O75915 188 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 DPM2O94777 84 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 OR2A4O95047 310 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 SLC2A10O95528 541 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF682O95780 498 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 AIFM1O95831 613 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 LY6G6DO95868 133 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CXorf1O96002 111 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 GPX1P07203 203 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CTSDP07339 412 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CD14P08571 375 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 LGALS1P09382 135 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 SLC35G6P0C7Q6 338 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ERGP11308 486 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 PGAM2P15259 253 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CSRP1P21291 193 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 SAA4P35542 130 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 TGFBR1P36897 503 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 KIR2DS2P43631 304 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 GPM6AP51674 278 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 NDUFA6P56556 154 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 RBM11P57052 281 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 H2BFSP57053 126 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 RND3P61587 244 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 HBG1P69891 147 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 HBG2P69892 147 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF92Q03936 586 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 DHRS2Q13268 280 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 C1DQ13901 141 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 MMDQ15546 238 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 MS4A13Q5J8X5 152 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 FAM201AQ5SY85 155 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CGB2Q6NT52 195 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 HRCT1Q6UXD1 115 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF550Q7Z398 422 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 LRP11Q86VZ4 500 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CBLN2Q8IUK8 224 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 C20orf196Q8IYI0 205 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CD177Q8N6Q3 437 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 YIPF7Q8N8F6 280 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF615Q8N8J6 731 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF491Q8N8L2 437 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 BPIFB6Q8NFQ5 453 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 OR2T33Q8NG76 320 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 OR2M3Q8NG83 312 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 OR8B12Q8NGG6 310 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 OR51G1Q8NGK1 321 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 NEIL3Q8TAT5 605 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF431Q8TF32 576 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CT55Q8WUE5 264 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 DNAJA3Q96EY1 480 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ADAT3Q96EY9 351 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 FMC1Q96HJ9 113 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms