RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 FAM216BQ8N7L0 139 aa11.15□□□□□ -0.62
SIRPA-204ENST00000622179 GTF3AQ92664 365 aaKnown RBP11.15□□□□□ -0.62
SIRPA-204ENST00000622179 ZNF714Q96N38 554 aa11.15□□□□□ -0.62
SIRPA-204ENST00000622179 TCF19Q9Y242 345 aa11.15□□□□□ -0.62
SIRPA-204ENST00000622179 SEC14L6B5MCN3 397 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 HERPUD1Q15011 391 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 S100A7AQ86SG5 101 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 OR10G8Q8NGN5 311 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 LILRB1Q8NHL6 650 aaPredicted RBP11.14□□□□□ -0.63
SIRPA-204ENST00000622179 CRIM1Q9NZV1 1036 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 MIOXQ9UGB7 285 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 DKK1O94907 266 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 PMS2P11Q13670 270 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 ASCL4Q6XD76 172 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 ZNF439Q8NDP4 499 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 NAT8BQ9UHF3 227 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 INSIG2Q9Y5U4 225 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 INTS1Q8N201 2190 aaKnown RBP11.14□□□□□ -0.63
SIRPA-204ENST00000622179 H0Y8G0 127 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 CXorf1O96002 111 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 PRRX1P54821 245 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 GCSAMQ8N6F7 178 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 ZNF525Q8N782 197 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 C1orf162Q8NEQ5 155 aaPredicted RBP11.14□□□□□ -0.63
SIRPA-204ENST00000622179 OR1L8Q8NGR8 309 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 GNB4Q9HAV0 340 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 TECRQ9NZ01 308 aaKnown RBP11.14□□□□□ -0.63
SIRPA-204ENST00000622179 A0A1W2PN81 502 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 FCN1O00602 326 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 FAM3BP58499 235 aaPredicted RBP11.14□□□□□ -0.63
SIRPA-204ENST00000622179 TFF3Q07654 80 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 OR1B1Q8NGR6 318 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 ZDHHC8Q9ULC8 765 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 AUP1Q9Y679 476 aa11.14□□□□□ -0.63
SIRPA-204ENST00000622179 SRP19P09132 144 aaKnown RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 OR10J1P30954 320 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 RNF138Q8WVD3 245 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 SFXN3Q9BWM7 321 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 USF3Q68DE3 2245 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 IGHV1-18A0A0C4DH31 117 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 KIAA1324LA8MWY0 1029 aaPredicted RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 ATXN7O15265 892 aaPredicted RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 PDE6DO43924 150 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 COLCA1Q6ZS62 124 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 ABHD17AQ96GS6 310 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 CCL21O00585 134 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 HSPE1P61604 102 aaKnown RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 SUMO1P63165 101 aaKnown RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 HOXA4Q00056 320 aaPredicted RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 HABP2Q14520 560 aaPredicted RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 IDI2-AS1Q9NZ38 188 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 CISD1Q9NZ45 108 aaKnown RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 LOC102723971A0A1B0GUV8 181 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 PSMG3Q9BT73 122 aaPredicted RBP11.13□□□□□ -0.63
SIRPA-204ENST00000622179 CLCF1Q9UBD9 225 aa11.13□□□□□ -0.63
SIRPA-204ENST00000622179 CD40P25942 277 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 LINC00205P59089 165 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 SPNS3Q6ZMD2 512 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 SGMS2Q8NHU3 365 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 TMEM171Q8WVE6 324 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 ANAPC16Q96DE5 110 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 SELLP14151 372 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 PCGF1Q9BSM1 259 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 K7EQM0 130 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 RAB4AP20338 218 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 LYPD6Q86Y78 171 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 SIGLECL1Q8N7X8 197 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 PARLQ9H300 379 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 VSIRQ9H7M9 311 aa11.12□□□□□ -0.63
SIRPA-204ENST00000622179 A0A0G2JRQ6 117 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 HELTA6NFD8 242 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 CD5P06127 495 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 SMIM6P0DI80 62 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 HCP5Q6MZN7 132 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 NPCDR1Q9BY65 106 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 PLAUP00749 431 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 ARL14EPLP0DKL9 152 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 ADCYAP1P18509 176 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 LYZP61626 148 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 ZNF146Q15072 292 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 CLDND2Q8NHS1 167 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 PACRGQ96M98 296 aaPredicted RBP11.11□□□□□ -0.63
SIRPA-204ENST00000622179 PLCE1Q9P212 2302 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 KRTDAPP60985 99 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 GNB2P62879 340 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 MPDU1O75352 247 aa11.11□□□□□ -0.63
SIRPA-204ENST00000622179 P2RX4Q99571 388 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms