RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SDSLQ96GA7 329 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 HSD17B10Q99714 261 aaKnown RBP16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 TXNDC17Q9BRA2 123 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 TMEM204Q9BSN7 226 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 ZDHHC11Q9H8X9 412 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 CHODLQ9H9P2 273 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 TMEM106BQ9NUM4 274 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 TET2Q6N021 2002 aaPredicted RBP16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 DMDP11532 3685 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 FAM186AA6NE01 2351 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 IGHV3-43A0A0B4J1X8 118 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 SOX15O60248 233 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 IGHV3-43DP0DP04 118 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 BTF3P20290 206 aaKnown RBP16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 SSTR5P35346 364 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 PLGLB1Q02325 96 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 TREML4Q6UXN2 200 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 ZNF826PQ6ZT77 177 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 TMPRSS7Q7RTY8 843 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 OCC1Q8TAD7 63 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 IQCF6A8MYZ5 107 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 RRHO14718 337 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 MPDU1O75352 247 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 HPRT1P00492 218 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 CD33P20138 364 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 HNF1AP20823 631 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 GABRA2P47869 451 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 AARDQ4LEZ3 155 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 OR10G8Q8NGN5 311 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 RPL29P47914 159 aaKnown RBP16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 PSG7Q13046 419 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 CXorf67Q86X51 503 aaPredicted RBP16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 C11orf53Q8IXP5 236 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 MGST2Q99735 147 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 PSG11Q9UQ72 335 aa16.28■□□□□ 0.2
PDLIM3-212ENST00000620787 ZNF718Q3SXZ3 478 aa16.27■□□□□ 0.2
PDLIM3-212ENST00000620787 GGTLC1Q9BX51 225 aa16.27■□□□□ 0.2
PDLIM3-212ENST00000620787 A0A1B0GWJ7 208 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 DEFB108AA8MXU0 73 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 PRSS46E5RG02 174 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 CXorf1O96002 111 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 ESDP10768 282 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 CBLN1P23435 193 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 THBS3P49746 956 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 FOXF2Q12947 444 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 DCAF10Q5QP82 559 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 TPTE2P1Q5T6R2 138 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 MIC13Q5XKP0 118 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 TOMM20LQ6UXN7 152 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 TEX43Q6ZNM6 134 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 TPRX1Q8N7U7 411 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 OR13A1Q8NGR1 328 aa16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 YTHDF2Q9Y5A9 579 aaKnown RBP16.27■□□□□ 0.19
PDLIM3-212ENST00000620787 TPPP2P59282 170 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 C20orf144Q9BQM9 153 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 MS4A5Q9H3V2 200 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 METRNQ9UJH8 293 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 CELSR3Q9NYQ7 3312 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 ZNF25P17030 456 aaPredicted RBP16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 MPV17P39210 176 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 PAFAH1B2P68402 229 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 MRPL49Q13405 166 aaKnown RBP16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 HLA-DRB5Q30154 266 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 TDRG1Q3Y452 100 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 ZNF705AQ6ZN79 300 aaPredicted RBP16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 ACP7Q6ZNF0 438 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 RFESDQ8TAC1 157 aa16.26■□□□□ 0.19
PDLIM3-212ENST00000620787 K7EN84 100 aa16.25■□□□□ 0.19
PDLIM3-212ENST00000620787 TNFSF13O75888 250 aa16.25■□□□□ 0.19
PDLIM3-212ENST00000620787 CER1O95813 267 aa16.25■□□□□ 0.19
PDLIM3-212ENST00000620787 LINC00696Q6ZRV3 163 aa16.25■□□□□ 0.19
PDLIM3-212ENST00000620787 MRPL52Q86TS9 123 aaKnown RBP16.25■□□□□ 0.19
PDLIM3-212ENST00000620787 TMEM105Q8N8V8 129 aa16.25■□□□□ 0.19
PDLIM3-212ENST00000620787 IL36BQ9NZH7 164 aa16.25■□□□□ 0.19
PDLIM3-212ENST00000620787 TRAV9-1A0A075B6T8 112 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 ZNF891A8MT65 544 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 M0QZK8 103 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 AQP7O14520 342 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 SERF1AO75920 110 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 VDAC2P45880 294 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 ZNF90Q03938 601 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 PDLIM3Q53GG5 364 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 PEAR1Q5VY43 1037 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 PRR7Q8TB68 274 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 Q8TCH9 128 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 MRPL18Q9H0U6 180 aaKnown RBP16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 OBP2BQ9NPH6 170 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 PROP1O75360 226 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 DUTP33316 252 aaKnown RBP16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 MEOX1P50221 254 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 TMPRSS3P57727 454 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 C1orf159Q96HA4 380 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 IER2Q9BTL4 223 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 PARD6AQ9NPB6 346 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 MED13Q9UHV7 2174 aa16.24■□□□□ 0.19
PDLIM3-212ENST00000620787 FAM90A9PA6NNJ1 464 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 SLC17A3O00476 420 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 FCGR3BO75015 233 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 CRISP2P16562 243 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 RPP30P78346 268 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms