RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 A0A0G2JLM5 398 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 NPIPB13A6NJU9 1138 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 A8MWL6 223 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 NPIPB4C9JG80 1138 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 KLF4O43474 513 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 ZNF207O43670 478 aaKnown RBP9.66□□□□□ -0.86
CLIP1-219ENST00000620786 IL4P05112 153 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 THBDP07204 575 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 ZNF56Q15929 161 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 GALNT14Q96FL9 552 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 OR51M1Q9H341 326 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 LHX2P50458 406 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
CLIP1-219ENST00000620786 CD69Q07108 199 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 FAM74A4Q5TZK3 123 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 TMEM252Q8N6L7 170 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 CBY3A6NI87 242 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 E9PLN8 166 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 MOSP00540 346 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 ZNF502Q8TBZ5 544 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 VKORC1Q9BQB6 163 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 PLA2G10O15496 165 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 ZFP36L1Q07352 338 aaKnown RBP9.66□□□□□ -0.86
CLIP1-219ENST00000620786 ZNF79Q15937 498 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 DRAM1Q8N682 238 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 OR4C5Q8NGB2 326 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 FBXL7Q9UJT9 491 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 GPR132Q9UNW8 380 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
CLIP1-219ENST00000620786 ISOC2Q96AB3 205 aa9.66□□□□□ -0.86
CLIP1-219ENST00000620786 RBM38Q9H0Z9 239 aaKnown RBP9.66□□□□□ -0.86
CLIP1-219ENST00000620786 PSME4Q14997 1843 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 IGHV3-49A0A0A0MS15 119 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 BCL2P10415 239 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 ARPC1AQ92747 370 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 TBX15Q96SF7 602 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 FAM90A26D6RGX4 464 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 NDUFB4O95168 129 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 CD99P14209 185 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 GNLYP22749 145 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 CKS2P33552 79 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 POC1AQ8NBT0 407 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 GPR82Q96P67 336 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 NPFFO15130 113 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 MFAP2P55001 183 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 RPS20P60866 119 aaKnown RBP9.65□□□□□ -0.86
CLIP1-219ENST00000620786 PRSS8Q16651 343 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 NPIPB3Q92617 1050 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 PEMTQ9UBM1 199 aa9.65□□□□□ -0.86
CLIP1-219ENST00000620786 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.65□□□□□ -0.87
CLIP1-219ENST00000620786 FAM74A7A6NL05 159 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 HKR1P10072 659 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 DLX6P56179 175 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 TCTAP57738 103 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 ASPHD2Q6ICH7 369 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 FAM159AQ6UWV7 190 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 ZIC4Q8N9L1 334 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 OR51G1Q8NGK1 321 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 TAF15Q92804 592 aaKnown RBP eCLIP9.65□□□□□ -0.87
CLIP1-219ENST00000620786 NPFFR1Q9GZQ6 430 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 SPRR3Q9UBC9 169 aa9.65□□□□□ -0.87
CLIP1-219ENST00000620786 HLA-DQB1P01920 261 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 GCSHP23434 173 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 ZNF345Q14585 488 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 ZXDCQ2QGD7 858 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-219ENST00000620786 ALX4Q9H161 411 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-219ENST00000620786 TDRD6O60522 2096 aaKnown RBP9.64□□□□□ -0.87
CLIP1-219ENST00000620786 PCM1Q15154 2024 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 C8orf88P0DMB2 117 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 P2RY4P51582 365 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 LHFPL5Q8TAF8 219 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 ELF5Q9UKW6 265 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-219ENST00000620786 CACNA1CQ13936 2221 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-219ENST00000620786 TMEM218A2RU14 115 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 NUDT3O95989 172 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 TRPM7Q96QT4 1865 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 FOXI3A8MTJ6 420 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-219ENST00000620786 CD74P04233 296 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 CFHR1Q03591 330 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 NSUN5P1Q3KNT7 163 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 LINC01590Q5TEZ4 76 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 PQLC2Q6ZP29 291 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 ASCC3Q8N3C0 2202 aaKnown RBP9.64□□□□□ -0.87
CLIP1-219ENST00000620786 AMY1AP04745 511 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 ARL14EPLP0DKL9 152 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 PSG7Q13046 419 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 CLEC19AQ6UXS0 136 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 C9orf62Q8N4C0 152 aa9.64□□□□□ -0.87
CLIP1-219ENST00000620786 IQCF6A8MYZ5 107 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 HTN3P15516 51 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 NRN1LQ496H8 165 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 NTN3O00634 580 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-219ENST00000620786 TMEM177Q53S58 311 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 TUBD1Q9UJT1 453 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 ELOA3CA0A087WX78 387 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-219ENST00000620786 IGKV1D-43A0A0B4J1Z2 117 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms