RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 HIST1H2BHQ93079 126 aa9.28□□□□□ -0.92
TP53-223ENST00000618944 HIST1H2BNQ99877 126 aa9.28□□□□□ -0.92
TP53-223ENST00000618944 HIST1H2BMQ99879 126 aa9.28□□□□□ -0.92
TP53-223ENST00000618944 MRPL37Q9BZE1 423 aaKnown RBP9.28□□□□□ -0.92
TP53-223ENST00000618944 OR51M1Q9H341 326 aa9.28□□□□□ -0.92
TP53-223ENST00000618944 FAM215AQ9Y5M1 114 aa9.28□□□□□ -0.92
TP53-223ENST00000618944 TRAV38-1A0A0B4J264 116 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 A0A1B0GWJ7 208 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 IFITM10A6NMD0 228 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 RRHO14718 337 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 HPRT1P00492 218 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 FAM27E3Q08E93 113 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 TMEM241Q24JQ0 296 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 TRAT1Q6PIZ9 186 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 FAM90A1Q86YD7 464 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 S1PR3Q99500 378 aa9.27□□□□□ -0.92
TP53-223ENST00000618944 HEYLQ9NQ87 328 aaPredicted RBP9.27□□□□□ -0.92
TP53-223ENST00000618944 CEACAM4O75871 244 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 MBP02144 154 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 CD1BP29016 333 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 TIMM23BQ5SRD1 257 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 TGIF2LYQ8IUE0 185 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 PPP1R35Q8TAP8 253 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 FRZBQ92765 325 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 PATZ1Q9HBE1 687 aaKnown RBP9.27□□□□□ -0.93
TP53-223ENST00000618944 CALYQ9NYX4 217 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 JPT1Q9UK76 154 aa9.27□□□□□ -0.93
TP53-223ENST00000618944 YPEL1O60688 119 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 UBE2G2P60604 165 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 RTP5Q14D33 572 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 C16orf82Q7Z2V1 217 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 C1orf87Q8N0U7 546 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 SDSLQ96GA7 329 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 RHOVQ96L33 236 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 YPEL2Q96QA6 119 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 TCEAL7Q9BRU2 100 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 IFI27L2Q9H2X8 130 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 PARLQ9H300 379 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 C17orf112F2Z3M2 114 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 TRGC1P0CF51 173 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 COL8A2P25067 703 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 GLRXP35754 106 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 VWC2Q2TAL6 325 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 CT45A1Q5HYN5 189 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 CT45A3Q8NHU0 189 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 GGACTQ9BVM4 153 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 AURKAIP1Q9NWT8 199 aaPredicted RBP9.26□□□□□ -0.93
TP53-223ENST00000618944 CACNA1GO43497 2377 aa9.26□□□□□ -0.93
TP53-223ENST00000618944 KBTBD11O94819 623 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 LHBP01229 141 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 CDX1P47902 265 aaPredicted RBP9.25□□□□□ -0.93
TP53-223ENST00000618944 SPCS3P61009 180 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 ERVK-16P61578 105 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 RPL23P62829 140 aaKnown RBP9.25□□□□□ -0.93
TP53-223ENST00000618944 C17orf58Q2M2W7 97 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 BSXQ3C1V8 233 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 ACOT6Q3I5F7 207 aaPredicted RBP9.25□□□□□ -0.93
TP53-223ENST00000618944 C1orf174Q8IYL3 243 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 Q8N7P7 452 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 FAM169BQ8N8A8 192 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 SNRNP40Q96DI7 357 aaKnown RBP9.25□□□□□ -0.93
TP53-223ENST00000618944 CCL13Q99616 98 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 TMEM140Q9NV12 185 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 TMEM242Q9NWH2 141 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 DCAF16Q9NXF7 216 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 CEP250Q9BV73 2442 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 ZFHX2Q9C0A1 2572 aaPredicted RBP9.25□□□□□ -0.93
TP53-223ENST00000618944 MYOD1P15172 320 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 S100PP25815 95 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 CFHR2P36980 270 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 CDC34P49427 236 aaPredicted RBP9.25□□□□□ -0.93
TP53-223ENST00000618944 GNG10P50151 68 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 RND2P52198 227 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 NKX6-1P78426 367 aaPredicted RBP9.25□□□□□ -0.93
TP53-223ENST00000618944 RELBQ01201 579 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 PAX5Q02548 391 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 CR1LQ2VPA4 569 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 OR51G1Q8NGK1 321 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 AKAP13Q12802 2813 aa9.25□□□□□ -0.93
TP53-223ENST00000618944 RIF1Q5UIP0 2472 aaKnown RBP9.24□□□□□ -0.93
TP53-223ENST00000618944 A0A1W2PPV4 95 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 F2RL2O00254 374 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 TM4SF5O14894 197 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 GYPAP02724 150 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 SOD3P08294 240 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 NPPCP23582 126 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 TNFAIP6P98066 277 aaPredicted RBP9.24□□□□□ -0.93
TP53-223ENST00000618944 PMS2P11Q13670 270 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 PYY3Q5JQD4 70 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 C1orf185Q5T7R7 199 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 CST9LP1Q5W188 147 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 CYP2G1PQ6ZSU1 146 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 LYG1Q8N1E2 194 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 PFDN5Q99471 154 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 TMEM204Q9BSN7 226 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 HINT2Q9BX68 163 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 GPR61Q9BZJ8 451 aa9.24□□□□□ -0.93
TP53-223ENST00000618944 MS4A5Q9H3V2 200 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms