RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 ZNF491Q8N8L2 437 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 ZBTB34Q8NCN2 500 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 FAM103A1Q9BTL3 118 aaKnown RBP19.4■□□□□ 0.7
PMS1-220ENST00000618056 ADAM30Q9UKF2 790 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 A0A1W2PN81 502 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 CCL24O00175 119 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 DUS4LO95620 317 aaKnown RBP19.39■□□□□ 0.69
PMS1-220ENST00000618056 IGLL1P15814 213 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 CD40LGP29965 261 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 CHRNA7P36544 502 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 ETV6P41212 452 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 ZNF45Q02386 682 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 DYRK1AQ13627 763 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 PDLIM3Q53GG5 364 aaPredicted RBP19.39■□□□□ 0.69
PMS1-220ENST00000618056 ACTBL2Q562R1 376 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 PYHIN1Q6K0P9 492 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 UNQ5815/PRO19632Q6UWF5 114 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 DHRS11Q6UWP2 260 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 LFNGQ8NES3 379 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 OR5M8Q8NGP6 311 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 CCL28Q9NRJ3 127 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 EHFQ9NZC4 300 aa19.39■□□□□ 0.69
PMS1-220ENST00000618056 RGS5O15539 181 aa19.38■□□□□ 0.69
PMS1-220ENST00000618056 PPP5CP53041 499 aa19.38■□□□□ 0.69
PMS1-220ENST00000618056 MRGPRG-AS1Q2M3A8 158 aa19.38■□□□□ 0.69
PMS1-220ENST00000618056 SPANXN2Q5MJ10 180 aa19.38■□□□□ 0.69
PMS1-220ENST00000618056 TCTEX1D2Q8WW35 142 aa19.38■□□□□ 0.69
PMS1-220ENST00000618056 TAS2R8Q9NYW2 309 aa19.38■□□□□ 0.69
PMS1-220ENST00000618056 VSIG4Q9Y279 399 aa19.38■□□□□ 0.69
PMS1-220ENST00000618056 CNIH1O95406 144 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 RFX2P48378 723 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 RUNX1Q01196 453 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 DEFB136Q30KP8 78 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 LYSMD2Q8IV50 215 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 OR5H2Q8NGV7 314 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 OR4S2Q8NH73 311 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 GRPEL2Q8TAA5 225 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 SLC5A7Q9GZV3 580 aa19.37■□□□□ 0.69
PMS1-220ENST00000618056 SULT1C2O00338 296 aa19.36■□□□□ 0.69
PMS1-220ENST00000618056 CTDSP2O14595 271 aa19.36■□□□□ 0.69
PMS1-220ENST00000618056 BRWD1-AS2P59051 145 aa19.36■□□□□ 0.69
PMS1-220ENST00000618056 CCDC190Q86UF4 302 aa19.36■□□□□ 0.69
PMS1-220ENST00000618056 SNX29P2Q8IUI4 249 aa19.36■□□□□ 0.69
PMS1-220ENST00000618056 DUX3Q96PT4 197 aa19.36■□□□□ 0.69
PMS1-220ENST00000618056 FAM25AB3EWG3 89 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 FAM25CB3EWG5 89 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 FAM25GB3EWG6 89 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 I3L521 148 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 TPPPO94811 219 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 PMP2P02689 132 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 SAA1P0DJI8 122 aaPredicted RBP19.35■□□□□ 0.69
PMS1-220ENST00000618056 KIR2DS2P43631 304 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 FXYD4P59646 89 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 GNB1P62873 340 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 FHL3Q13643 280 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 PRSS8Q16651 343 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 OR2B11Q5JQS5 317 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 TMEM68Q96MH6 324 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 GNB4Q9HAV0 340 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 HERV-K104P61576 105 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 IDO2Q6ZQW0 420 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 LAX1Q8IWV1 398 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 MOB3AQ96BX8 217 aa19.35■□□□□ 0.69
PMS1-220ENST00000618056 CREBL2O60519 120 aaPredicted RBP19.34■□□□□ 0.69
PMS1-220ENST00000618056 TNFSF8P32971 234 aa19.34■□□□□ 0.69
PMS1-220ENST00000618056 HRH1P35367 487 aa19.34■□□□□ 0.69
PMS1-220ENST00000618056 ZNF818PQ6ZRF7 136 aa19.34■□□□□ 0.69
PMS1-220ENST00000618056 TMEM17Q86X19 198 aa19.34■□□□□ 0.69
PMS1-220ENST00000618056 GPHA2Q96T91 129 aa19.34■□□□□ 0.69
PMS1-220ENST00000618056 ZNF2Q9BSG1 426 aaPredicted RBP19.34■□□□□ 0.69
PMS1-220ENST00000618056 MCRIP2Q9BUT9 160 aaKnown RBP19.34■□□□□ 0.69
PMS1-220ENST00000618056 GPR61Q9BZJ8 451 aa19.34■□□□□ 0.69
PMS1-220ENST00000618056 SLA2Q9H6Q3 261 aa19.34■□□□□ 0.69
PMS1-220ENST00000618056 RBFOX2O43251 390 aaKnown RBP eCLIP19.33■□□□□ 0.68
PMS1-220ENST00000618056 TNFSF12O43508 249 aa19.33■□□□□ 0.68
PMS1-220ENST00000618056 RCVRNP35243 200 aa19.33■□□□□ 0.68
PMS1-220ENST00000618056 RGS21Q2M5E4 152 aa19.33■□□□□ 0.68
PMS1-220ENST00000618056 EXTL2Q9UBQ6 330 aa19.33■□□□□ 0.68
PMS1-220ENST00000618056 A0A1B0GVG6 124 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 H3BUA1 57 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 HLA-DMAP28067 261 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 GNRHRP30968 328 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 CATR1Q13166 79 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 REC114Q7Z4M0 266 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 MMD2Q8IY49 270 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 OR11H1Q8NG94 326 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 CASTOR1Q8WTX7 329 aa19.32■□□□□ 0.68
PMS1-220ENST00000618056 ZNF430Q9H8G1 570 aaPredicted RBP19.32■□□□□ 0.68
PMS1-220ENST00000618056 UPK1BO75841 260 aa19.31■□□□□ 0.68
PMS1-220ENST00000618056 BRI3O95415 125 aa19.31■□□□□ 0.68
PMS1-220ENST00000618056 TNXAQ16473 311 aa19.31■□□□□ 0.68
PMS1-220ENST00000618056 ASPHD1Q5U4P2 390 aa19.31■□□□□ 0.68
PMS1-220ENST00000618056 OR6F1Q8NGZ6 308 aa19.31■□□□□ 0.68
PMS1-220ENST00000618056 VSTM2AQ8TAG5 236 aa19.31■□□□□ 0.68
PMS1-220ENST00000618056 C15orf40Q8WUR7 153 aa19.31■□□□□ 0.68
PMS1-220ENST00000618056 HRASP01112 189 aa19.3■□□□□ 0.68
PMS1-220ENST00000618056 SPAG16Q8N0X2 631 aa19.3■□□□□ 0.68
PMS1-220ENST00000618056 PUSL1Q8N0Z8 303 aaKnown RBP19.3■□□□□ 0.68
PMS1-220ENST00000618056 POC5Q8NA72 575 aa19.3■□□□□ 0.68
PMS1-220ENST00000618056 SRSF12Q8WXF0 261 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms