RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 MDFIQ99750 246 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 BPESC1Q9GZL8 116 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 RCL1Q9Y2P8 373 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 JMJD1CQ15652 2540 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 BORCS7-ASMTA0A0B4J1R7 106 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 IGHV2-26A0A0B4J1V2 119 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 INAFM1C9JVW0 142 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 H7C2Y5 167 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 RAMP3O60896 148 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 G6PCP35575 357 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 ZNF137PP52743 207 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 RPP30P78346 268 aaKnown RBP13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 OR5AC2Q9NZP5 309 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 UBQLN2Q9UHD9 624 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 TLN2Q9Y4G6 2542 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 HIVEP2P31629 2446 aa13.69□□□□□ -0.22
TRAPPC3-210ENST00000617904 SSSCA1O60232 199 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 FCN3O75636 299 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 CRYZL1O95825 349 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 PRTN3P24158 256 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 CAV2P51636 162 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 TAS2R30P59541 319 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 STX12Q86Y82 276 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 ODF3L1Q8IXM7 274 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 CLDND2Q8NHS1 167 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 VSTM2AQ8TAG5 236 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 DDB2Q92466 427 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 C5orf30Q96GV9 206 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 ZNF471Q9BX82 626 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 FKBP11Q9NYL4 201 aa13.68□□□□□ -0.22
TRAPPC3-210ENST00000617904 LEUTXA8MZ59 168 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 SYNGR2O43760 224 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 PITX3O75364 302 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 IGKV1-39P01597 117 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 IGKV1D-39P04432 117 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 TPT1P13693 172 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 SLC25A16P16260 332 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 ARF6P62330 175 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 BAXQ07812 192 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 TEX261Q6UWH6 196 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 OR2C3Q8N628 320 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 C10orf105Q8TEF2 133 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 LHX4Q969G2 390 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 RPEQ96AT9 228 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 ZNF251Q9BRH9 671 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 WASHC3Q9Y3C0 194 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 U3KQ87 197 aa13.67□□□□□ -0.22
TRAPPC3-210ENST00000617904 RNF222A6NCQ9 220 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 C22orf46C9J442 243 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 H0YIZ8 118 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 SHOXO15266 292 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 JTBO76095 146 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 HTR1DP28221 377 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 LGALS4P56470 323 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 POLR2GP62487 172 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 KRTAP1-1Q07627 177 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 CXorf66Q5JRM2 361 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 OR4C13Q8NGP0 309 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 PHYHIPLQ96FC7 376 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 NUP50Q9UKX7 468 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 INSIG2Q9Y5U4 225 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 WSB1Q9Y6I7 421 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 ZANQ9Y493 2812 aa13.66□□□□□ -0.22
TRAPPC3-210ENST00000617904 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 OOSP1A8MZH6 123 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 CHST1O43916 411 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 PROP1O75360 226 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 IFNA17P01571 189 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 CT45A6P0DMU7 189 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 CT45A5P0DMU8 189 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 CT45A7P0DMV0 189 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 HKR1P10072 659 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 COX7A1P24310 79 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 CCDC144NLQ6NUI1 221 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 PNKDQ8N490 385 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 ZNF383Q8NA42 475 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 OR11H6Q8NGC7 330 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 OR5AN1Q8NGI8 311 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 RHOVQ96L33 236 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 LYRM2Q9NU23 88 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 DSCAML1Q8TD84 2053 aa13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 ANK3Q12955 4377 aaKnown RBP13.65□□□□□ -0.22
TRAPPC3-210ENST00000617904 CEBPZOSA8MTT3 80 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 BUB1B-PAK6H3BSN5 160 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 IGLV1-47P01700 117 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 ARG1P05089 322 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 LGALS7P47929 136 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 HBG1P69891 147 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 HBG2P69892 147 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 LCN2P80188 198 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 IFITM2Q01629 132 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 TNFRSF9Q07011 255 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 ZNF266Q14584 549 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 POU2AF1Q16633 256 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms