RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 TSTD3H0UI37 97 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 SSX2Q16385 188 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 Q6P435 159 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 TPPP3Q9BW30 176 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 MED13LQ71F56 2210 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 A0A1W2PNU3 283 aaPredicted RBP11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 MLNRO43193 412 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 CNN1P51911 297 aaKnown RBP11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 NCMAPQ5T1S8 102 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 TECRQ9NZ01 308 aaKnown RBP11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 TOX4O94842 621 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 RCC1LQ96I51 464 aaKnown RBP11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 ASCL3Q9NQ33 180 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 SPINK4O60575 86 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 ETFRF1Q6IPR1 90 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 AMMECR1Q9Y4X0 333 aaPredicted RBP11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 SLC25A15Q9Y619 301 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 SELLP14151 372 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 RNF212Q495C1 297 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 TOLLIPQ9H0E2 274 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 GNB4Q9HAV0 340 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 SEBOXQ9HB31 216 aaPredicted RBP11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 KBTBD11-OT1A0A1B0GTJ5 212 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 MPDU1O75352 247 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 RTP5Q14D33 572 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 PSMG3Q9BT73 122 aaPredicted RBP11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 SIRT7Q9NRC8 400 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 RNF115Q9Y4L5 304 aa11.05□□□□□ -0.64
PPP4R3B-206ENST00000616407 IGHV3-21A0A0B4J1V1 117 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 AP4M1O00189 453 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 CEACAM3P40198 252 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 GNG4P50150 75 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 LRRC75BQ2VPJ9 315 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 KDF1Q8NAX2 398 aaPredicted RBP11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 CXorf1O96002 111 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR10J1P30954 320 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 RPL8P62917 257 aaKnown RBP11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 NMSQ5H8A3 153 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 GLRX5Q86SX6 157 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 ZNF525Q8N782 197 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR2T10Q8NGZ9 312 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 TMEM167BQ9NRX6 74 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 SRRM5B3KS81 715 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 DNASE2O00115 360 aaPredicted RBP11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 IGKV3-15P01624 115 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 CD55P08174 381 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 SNRPCP09234 159 aaKnown RBP11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 TIMP3P35625 211 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 FAM216AQ8WUB2 273 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 TMPRSS5Q9H3S3 457 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
PPP4R3B-206ENST00000616407 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 K7EQM0 130 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 KBTBD11O94819 623 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 MDKP21741 143 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 MORN2Q502X0 79 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 PCSK4Q6UW60 755 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 Q6ZS92 163 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 FAM90A1Q86YD7 464 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 SPACA3Q8IXA5 215 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 RFNGQ9Y644 331 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 IGHV1-69-2A0A0G2JMI3 117 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 SLC25A17O43808 307 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 FABP4P15090 132 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR1B1Q8NGR6 318 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 TRAPPC1Q9Y5R8 145 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 MBD3L4A6NDZ8 208 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 MBD3L3A6NE82 208 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 MBD3L5A6NJ08 208 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 DHRS7BQ6IAN0 325 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 ZNF474Q6S9Z5 364 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 Q6ZS49 121 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR1L4Q8NGR5 311 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR4X1Q8NH49 305 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 MBD3L2Q8NHZ7 208 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 SPRY4Q9C004 299 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 INTS1Q8N201 2190 aaKnown RBP11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 USF3Q68DE3 2245 aa11.03□□□□□ -0.64
PPP4R3B-206ENST00000616407 MBNL2Q5VZF2 373 aaKnown RBP11.02□□□□□ -0.64
PPP4R3B-206ENST00000616407 SLC16A13Q7RTY0 426 aa11.02□□□□□ -0.64
PPP4R3B-206ENST00000616407 ZGRF1Q86YA3 2104 aa11.02□□□□□ -0.64
PPP4R3B-206ENST00000616407 MUC15Q8N387 334 aa11.02□□□□□ -0.64
PPP4R3B-206ENST00000616407 UBTD1Q9HAC8 227 aa11.02□□□□□ -0.64
PPP4R3B-206ENST00000616407 TRBV6-6A0A0A6YYG2 114 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 PDE6DO43924 150 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 NDUFB4O95168 129 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 FAM157CP0CG43 387 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 S100A7P31151 101 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 CTDSP1Q9GZU7 261 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 LAMA2P24043 3122 aaKnown RBP11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 WNK2Q9Y3S1 2297 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 CUL9Q8IWT3 2517 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 NDUFA2O43678 99 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms