RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 E9PCH4 1651 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 FHITP49789 147 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 PRSS42Q7Z5A4 293 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 NKAPP1Q8N9T2 125 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 TAF15Q92804 592 aaKnown RBP eCLIP10.88□□□□□ -0.67
TCF4-248ENST00000616053 RMI2Q96E14 147 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
TCF4-248ENST00000616053 A0A0A6YYD5 115 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 LEPROTL1O95214 131 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 IGHV4-39P01824 125 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 ZNF488Q96MN9 340 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 ZNF561-AS1K7EIQ3 104 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 CFHR1Q03591 330 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 ZNF562Q6V9R5 426 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 TCF23Q7RTU1 214 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 DPM3Q9P2X0 92 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 C9orf170A2RU37 121 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 WDR82Q6UXN9 313 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 FLRT3Q9NZU0 649 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 OTX1P32242 354 aaPredicted RBP10.88□□□□□ -0.67
TCF4-248ENST00000616053 CNRIP1Q96F85 164 aaPredicted RBP10.88□□□□□ -0.67
TCF4-248ENST00000616053 SLC17A5Q9NRA2 495 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 CADP27708 2225 aa10.88□□□□□ -0.67
TCF4-248ENST00000616053 HIST1H4AP62805 103 aaKnown RBP10.87□□□□□ -0.67
TCF4-248ENST00000616053 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 LMO3Q8TAP4 145 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 GSN-AS1Q9NRJ2 163 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 TRAV1-2A0A0B4J238 106 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 MEF2BQ02080 365 aaPredicted RBP10.87□□□□□ -0.67
TCF4-248ENST00000616053 PPP1R1AQ13522 171 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 RNF133Q8WVZ7 376 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 ABHD17AQ96GS6 310 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 HBDP02042 147 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 APOHP02749 345 aaPredicted RBP10.87□□□□□ -0.67
TCF4-248ENST00000616053 TCEAL1Q15170 157 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 FREM3P0C091 2139 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 CACNA1EQ15878 2313 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 EFEMP2O95967 443 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 LINC00303Q3SY05 128 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 LEAP2Q969E1 77 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 P2RY1P47900 373 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 MUC21Q5SSG8 566 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 CTXND1A0A1B0GTU2 59 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 IGHV3-48P01763 117 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 TYMSP04818 313 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 ZNF826PQ6ZT77 177 aa10.87□□□□□ -0.67
TCF4-248ENST00000616053 RCC2Q9P258 522 aaKnown RBP10.87□□□□□ -0.67
TCF4-248ENST00000616053 IGHV3OR16-8A0A075B7F1 116 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 LIPT2A6NK58 231 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 FAM74A7A6NL05 159 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 FABP5Q01469 135 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 RTN4RL2Q86UN3 420 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 FAM181AQ8N9Y4 354 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
TCF4-248ENST00000616053 KCNS1Q96KK3 526 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 OR51M1Q9H341 326 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 SPINT1O43278 529 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 SMIM18P0DKX4 95 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 ZNF585BQ52M93 769 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 ZNF600Q6ZNG1 722 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 POLEQ07864 2286 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 UBE2BP63146 152 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 ALKAL1Q6UXT8 129 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 PRSS41Q7RTY9 318 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 FAM206AQ9NX38 181 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 CSRP2Q16527 193 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 C1QTNF12Q5T7M4 302 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 A0A0B4J2E0 115 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 A0A1B0GX12 115 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 F5H768 121 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 PSPNO60542 156 aa10.86□□□□□ -0.67
TCF4-248ENST00000616053 RPL36A-HNRNPH2H7BZ11 118 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 CD28P10747 220 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 RAE1P78406 368 aaKnown RBP10.85□□□□□ -0.67
TCF4-248ENST00000616053 FOXA2Q9Y261 457 aaPredicted RBP10.85□□□□□ -0.67
TCF4-248ENST00000616053 MROH2AA6NES4 1674 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 TRGV11A0A075B6L2 103 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 IGLV3-27P01718 113 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 RNF166Q96A37 237 aaPredicted RBP10.85□□□□□ -0.67
TCF4-248ENST00000616053 ALG14Q96F25 216 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 MCM3APO60318 1980 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 ZNF645Q8N7E2 425 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 MZB1Q8WU39 189 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 RHOVQ96L33 236 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 ANKRD31Q8N7Z5 1873 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 ATP1A1-AS1Q5TC04 95 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 SNHG12Q9BXW3 62 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 DSPPQ9NZW4 1301 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 IGLV3-10A0A075B6K4 115 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 BMPERQ8N8U9 685 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 TRGV1A0A0A0MS02 117 aa10.85□□□□□ -0.67
TCF4-248ENST00000616053 RBM11P57052 281 aaKnown RBP10.85□□□□□ -0.67
TCF4-248ENST00000616053 PAQR9Q6ZVX9 377 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms