RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 WDR61Q9GZS3 305 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 CYTL1Q9NRR1 136 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 PLSCR2Q9NRY7 297 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 COL6A3P12111 3177 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 TRAV20A0A0B4J274 112 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 HOXB1P14653 301 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 RANP62826 216 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 LHFPL4Q7Z7J7 247 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 SGK494Q96LW2 274 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 RASL11BQ9BPW5 248 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 TMEM56-RWDD3S4R434 201 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 ARL2-SNX15V9GYD0 113 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 SAA2-SAA4A0A096LPE2 208 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 TRGC2P03986 189 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 SAA2P0DJI9 122 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 S100A7P31151 101 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 SMIM15Q7Z3B0 74 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 STARD4Q96DR4 205 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 DENND4AQ7Z401 1863 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 WIPF3A6NGB9 483 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 USF1P22415 310 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 KIR2DL2P43627 348 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 C1orf174Q8IYL3 243 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 VSTM2AQ8TAG5 236 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 RNF166Q96A37 237 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 ELOVL5Q9NYP7 299 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 WASHC3Q9Y3C0 194 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 RALGAPA1Q6GYQ0 2036 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 MED12Q93074 2177 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 FREM3P0C091 2139 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 DBX1A6NMT0 343 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 IER3P46695 156 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 ARF6P62330 175 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 FOXL2NBQ6ZUU3 175 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 RPRMLQ8N4K4 120 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 OR2T10Q8NGZ9 312 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 GALNT14Q96FL9 552 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 DIRC2Q96SL1 478 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 NPCDR1Q9BY65 106 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 SELENOKQ9Y6D0 94 aa7.49□□□□□ -1.21
PDLIM5-222ENST00000615540 PPIAL4CA0A0B4J2A2 164 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 HELTA6NFD8 242 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 S100A8P05109 93 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 PPIAL4GP0DN37 164 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 CCL3L1P16619 93 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 UCP1P25874 307 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 CD177Q8N6Q3 437 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 OR4D5Q8NGN0 318 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 TMEM18Q96B42 140 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 MRPL20Q9BYC9 149 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 NPVFQ9HCQ7 196 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 NAGKQ9UJ70 344 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 LOC102723971A0A1B0GUV8 181 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 CLN5O75503 358 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 TPPP2P59282 170 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 FXYD3Q14802 87 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 LHFPL1Q86WI0 220 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 PNKDQ8N490 385 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 OR10G8Q8NGN5 311 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 RHOVQ96L33 236 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 WFIKKN1Q96NZ8 548 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 TCF19Q9Y242 345 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 TMEM131Q92545 1883 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 GATCO43716 136 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 OR9G9P0C7N8 305 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 RPL8P62917 257 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 OR4A47Q6IF82 309 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 ZNF383Q8NA42 475 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 C1orf162Q8NEQ5 155 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 FAM222BQ8WU58 562 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 AAMDCQ9H7C9 122 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 F2RL2O00254 374 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 MOSP00540 346 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 CEACAM3P40198 252 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 CCL20P78556 96 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 PNRC1Q12796 327 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 PRNTQ86SH4 94 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 RAB24Q969Q5 203 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 GP6Q9HCN6 339 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 TMEM106BQ9NUM4 274 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 IL19Q9UHD0 177 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 RNF115Q9Y4L5 304 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 VPS13AQ96RL7 3174 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 IGKV3-7A0A075B6H7 116 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 SLC31A2O15432 143 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 PSPNO60542 156 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 GLRXP35754 106 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 AARDQ4LEZ3 155 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 TOMM20LQ6UXN7 152 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 STPG3Q8N7X2 389 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 PAXXQ9BUH6 204 aa7.48□□□□□ -1.21
PDLIM5-222ENST00000615540 FREM2Q5SZK8 3169 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 DLL1O00548 723 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 PCSK4Q6UW60 755 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 SPACA3Q8IXA5 215 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms