RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 FGF8P55075 233 aaPredicted RBP12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 PNRC1Q12796 327 aaPredicted RBP12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 TEX36Q5VZQ5 186 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 FAM90A2PQ658T7 463 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 ACSM6Q6P461 480 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 ZNF788Q6ZQV5 615 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 OR4S2Q8NH73 311 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 CA5BP1Q8WTZ4 195 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 LHX4Q969G2 390 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 GAFA1Q96PS6 74 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 C17orf112F2Z3M2 114 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 SOX15O60248 233 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 SELLP14151 372 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 IRF2P14316 349 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 RAB11AP62491 216 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 ZNF709Q8N972 641 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 CORO2AQ92828 525 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 NPCDR1Q9BY65 106 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 TP53TG5Q9Y2B4 290 aa12.19□□□□□ -0.46
CDKN1A-208ENST00000615513 ZNF729A6NN14 1252 aaPredicted RBP12.18□□□□□ -0.46
CDKN1A-208ENST00000615513 CYB5R3P00387 301 aaPredicted RBP12.18□□□□□ -0.46
CDKN1A-208ENST00000615513 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
CDKN1A-208ENST00000615513 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
CDKN1A-208ENST00000615513 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
CDKN1A-208ENST00000615513 ADTRPQ96IZ2 230 aa12.18□□□□□ -0.46
CDKN1A-208ENST00000615513 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
CDKN1A-208ENST00000615513 TRAV20A0A0B4J274 112 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 SLC31A2O15432 143 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 TNFRSF1AP19438 455 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 THBS3P49746 956 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 RELBQ01201 579 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 SPINK9Q5DT21 86 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 FAM209BQ5JX69 171 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 ACTR3CQ9C0K3 210 aaPredicted RBP12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 JKAMPQ9P055 326 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 ZFHX2Q9C0A1 2572 aaPredicted RBP12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 VDAC2P45880 294 aaPredicted RBP12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 TFF3Q07654 80 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 FFAR4Q5NUL3 377 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 SSX9Q7RTT3 188 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 Q8NA96 180 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 OR10G9Q8NGN4 311 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 OR10G7Q8NGN6 311 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 TMEM140Q9NV12 185 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 IDI2-AS1Q9NZ38 188 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 WDR83OSQ9Y284 106 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 ZNF835Q9Y2P0 537 aa12.17□□□□□ -0.46
CDKN1A-208ENST00000615513 TRGV8A0A0C4DH27 118 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 CD1BP29016 333 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 GFRALQ6UXV0 394 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 TCF23Q7RTU1 214 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 CISD2Q8N5K1 135 aaKnown RBP12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 CCL13Q99616 98 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 DIDO1Q9BTC0 2240 aaKnown RBP12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 SAA2-SAA4A0A096LPE2 208 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 MPDU1O75352 247 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 IGHV3-7P01780 117 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 SAA2P0DJI9 122 aaPredicted RBP12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 TMPRSS3P57727 454 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 KIAA0141Q14154 515 aaPredicted RBP12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 ADIPOQQ15848 244 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 NCMAPQ5T1S8 102 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 DUX4L9Q6RFH8 374 aaPredicted RBP12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 DEFB108BQ8NET1 73 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 MANBALQ9NQG1 85 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 TMEM242Q9NWH2 141 aa12.16□□□□□ -0.46
CDKN1A-208ENST00000615513 DPRXA6NFQ7 191 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 C17orf100A8MU93 164 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 CYB5BO43169 146 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 IFNA10P01566 189 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 GYPAP02724 150 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 HOXA5P20719 270 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 MRPS11P82912 194 aaKnown RBP12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 ACOT6Q3I5F7 207 aaPredicted RBP12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 WFDC8Q8IUA0 241 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 LEAP2Q969E1 77 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 SLC25A22Q9H936 323 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 GVINP1Q7Z2Y8 2422 aa12.15□□□□□ -0.46
CDKN1A-208ENST00000615513 hADV38S2A0JD32 116 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 C15orf61A6NNL5 157 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 TMEM250H0YL14 139 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 GFRA3O60609 400 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 IGHV2-70P01814 119 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 OR4A8P0C604 315 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 PSMB3P49720 205 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 POU2AF1Q16633 256 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 FAM216BQ8N7L0 139 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 RPUSD1Q9UJJ7 312 aaKnown RBP12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 FOXA2Q9Y261 457 aaPredicted RBP12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 LINC00312Q9Y6C7 94 aa12.14□□□□□ -0.47
CDKN1A-208ENST00000615513 DSCAMO60469 2012 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms