RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SCGB1D4Q6XE38 83 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 C17orf82Q86X59 251 aaPredicted RBP12.53□□□□□ -0.4
SNPH-203ENST00000614659 FAM90A1Q86YD7 464 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.53□□□□□ -0.4
SNPH-203ENST00000614659 SGMS2Q8NHU3 365 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 HSPB9Q9BQS6 159 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 TSC2P49815 1807 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 RNF222A6NCQ9 220 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 FAM216AQ8WUB2 273 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 ZFP30Q9Y2G7 519 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.4
SNPH-203ENST00000614659 HIST1H1BP16401 226 aaKnown RBP12.52□□□□□ -0.4
SNPH-203ENST00000614659 TMEM250H0YL14 139 aa12.52□□□□□ -0.4
SNPH-203ENST00000614659 HYPMO75409 117 aa12.52□□□□□ -0.4
SNPH-203ENST00000614659 CD40P25942 277 aa12.52□□□□□ -0.4
SNPH-203ENST00000614659 ZNF146Q15072 292 aa12.52□□□□□ -0.4
SNPH-203ENST00000614659 FAM168AQ92567 244 aa12.52□□□□□ -0.4
SNPH-203ENST00000614659 PPIAL4CA0A0B4J2A2 164 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 F5H697 171 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 ORM1P02763 201 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 PPIAL4GP0DN37 164 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 MDKP21741 143 aaPredicted RBP12.52□□□□□ -0.41
SNPH-203ENST00000614659 GLIPR1P48060 266 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 NPBWR2P48146 333 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 SRSF7Q16629 238 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNPH-203ENST00000614659 OR2D3Q8NGH3 330 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 MRPL32Q9BYC8 188 aaKnown RBP12.52□□□□□ -0.41
SNPH-203ENST00000614659 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 MMD2Q8IY49 270 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.41
SNPH-203ENST00000614659 TMEM56-RWDD3S4R434 201 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 CCDC88CQ9P219 2028 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 VENTXO95231 258 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
SNPH-203ENST00000614659 TMEM140Q9NV12 185 aa12.52□□□□□ -0.41
SNPH-203ENST00000614659 TRBV9A0A0B4J1U6 114 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 OR8A1Q8NGG7 326 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 RALYQ9UKM9 306 aaKnown RBP12.51□□□□□ -0.41
SNPH-203ENST00000614659 A1L4Q6 167 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 C17orf51A8MQB3 221 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 F8VVB4 439 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 F8VWA3 439 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 RAMP1O60894 148 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
SNPH-203ENST00000614659 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 DRAM1Q8N682 238 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 GFI1Q99684 422 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 UQCR10Q9UDW1 63 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 RPL27AP46776 148 aaKnown RBP12.51□□□□□ -0.41
SNPH-203ENST00000614659 GAMTQ14353 236 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 ZNF430Q9H8G1 570 aaPredicted RBP12.51□□□□□ -0.41
SNPH-203ENST00000614659 GBF1Q92538 1859 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 ZNF716A6NP11 495 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 SS18L1O75177 396 aaPredicted RBP12.51□□□□□ -0.41
SNPH-203ENST00000614659 ZNF735P0CB33 412 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
SNPH-203ENST00000614659 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 TGIF2-C20orf24A0A0A6YYL0 155 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 C1QL1O75973 258 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 CA2P00918 260 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 NBL1P41271 181 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 METTL1Q9UBP6 276 aaKnown RBP12.5□□□□□ -0.41
SNPH-203ENST00000614659 UFC1Q9Y3C8 167 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 REC114Q7Z4M0 266 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 C18orf12Q96KH6 178 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 SH3BGRL3Q9H299 93 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 AURKAIP1Q9NWT8 199 aaPredicted RBP12.5□□□□□ -0.41
SNPH-203ENST00000614659 KBTBD11O94819 623 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 HIST1H2BAQ96A08 127 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 CKAP5Q14008 2032 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 A0A1W2PS18 150 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
SNPH-203ENST00000614659 SMIM12Q96EX1 92 aa12.5□□□□□ -0.41
SNPH-203ENST00000614659 PARD6GQ9BYG4 376 aaPredicted RBP12.5□□□□□ -0.41
SNPH-203ENST00000614659 C2orf68Q2NKX9 166 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
SNPH-203ENST00000614659 A0A087WWC5 75 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 HLA-DQA1P01909 254 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 LINC00271P0C7V0 271 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 KLK2P20151 261 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 C12orf54Q6X4T0 127 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 LINC00469Q8N7U9 141 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 IL36RNQ9UBH0 155 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 PRR32B1ATL7 298 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 S1PR2O95136 353 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNPH-203ENST00000614659 TMEM186Q96B77 213 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 LOC105371267A0A1B0GV96 52 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 RPL30P62888 115 aaKnown RBP12.49□□□□□ -0.41
SNPH-203ENST00000614659 GBGT1Q8N5D6 347 aa12.49□□□□□ -0.41
SNPH-203ENST00000614659 A8MWL6 223 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 NDUFB4O95168 129 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 ECSCRQ19T08 205 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 LRRC75BQ2VPJ9 315 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 OR9G1Q8NH87 305 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms