RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 NEUROG1Q92886 237 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 MSI2Q96DH6 328 aaKnown RBP8.35□□□□□ -1.07
GGA3-221ENST00000614198 SMIM7Q9BQ49 75 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 Q9N2K0 584 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 MTCH1Q9NZJ7 389 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 FUT9Q9Y231 359 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 DOCK11Q5JSL3 2073 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 H7BYZ3 331 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 CD33P20138 364 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 Q6ZR03 302 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 TMEM252Q8N6L7 170 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 IMMP2LQ96T52 175 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 ZNF835Q9Y2P0 537 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 TENM4Q6N022 2769 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 CCL21O00585 134 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 PLA2G5P39877 138 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 CEBPDP49716 269 aaPredicted RBP8.34□□□□□ -1.07
GGA3-221ENST00000614198 KLRB1Q12918 225 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 ERASQ7Z444 233 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 PRR7Q8TB68 274 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 LIME1Q9H400 295 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 PLK3Q9H4B4 646 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 AURKAIP1Q9NWT8 199 aaPredicted RBP8.34□□□□□ -1.07
GGA3-221ENST00000614198 NAT8Q9UHE5 227 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 YLPM1P49750 1951 aaKnown RBP8.34□□□□□ -1.07
GGA3-221ENST00000614198 TRAV39A0A0B4J263 110 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 MLNRO43193 412 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 ADAM20O43506 726 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 GALR1P47211 349 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 RAB7AP51149 207 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 SELENOTP62341 195 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
GGA3-221ENST00000614198 Q6ZPA2 131 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 Q6ZSR3 168 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 SVIPQ8NHG7 77 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 LINC01560Q8TB33 94 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 MS4A10Q96PG2 267 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 PCGF1Q9BSM1 259 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 LYRM2Q9NU23 88 aaPredicted RBP8.34□□□□□ -1.07
GGA3-221ENST00000614198 LRRK2Q5S007 2527 aa8.34□□□□□ -1.07
GGA3-221ENST00000614198 M0QZ24 198 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 CDIPTO14735 213 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 WNT9BO14905 357 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 OR7C1O76099 320 aaPredicted RBP8.33□□□□□ -1.08
GGA3-221ENST00000614198 TYMSP04818 313 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 THBDP07204 575 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 CNN1P51911 297 aaKnown RBP8.33□□□□□ -1.08
GGA3-221ENST00000614198 TMEM267Q0VDI3 215 aaPredicted RBP8.33□□□□□ -1.08
GGA3-221ENST00000614198 PRAMEF6Q5VXH4 476 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 LEMD1Q68G75 181 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 CCDC71LQ8N9Z2 235 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 IL22RA2Q969J5 263 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 AGMATQ9BSE5 352 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 RSG1Q9BU20 258 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 OR6C3Q9NZP0 311 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 CDS2O95674 445 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
GGA3-221ENST00000614198 TAS2R30P59541 319 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 ZDHHC23Q8IYP9 409 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 NKX6-3A6NJ46 265 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 K7EP13 123 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 YPEL1O60688 119 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 HRASP01112 189 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 CHRNB4P30926 498 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 IL24Q13007 206 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 CYP2G1PQ6ZSU1 146 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 UBALD1Q8TB05 177 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 SFXN3Q9BWM7 321 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 TM2D1Q9BX74 207 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 OBP2BQ9NPH6 170 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 ST3GAL6Q9Y274 331 aa8.33□□□□□ -1.08
GGA3-221ENST00000614198 RBM7Q9Y580 266 aaKnown RBP8.33□□□□□ -1.08
GGA3-221ENST00000614198 BAXQ07812 192 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 OR5P3Q8WZ94 311 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 SDSLQ96GA7 329 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
GGA3-221ENST00000614198 PATZ1Q9HBE1 687 aaKnown RBP8.32□□□□□ -1.08
GGA3-221ENST00000614198 ZNF320A2RRD8 509 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 MAP1LC3B2A6NCE7 125 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 HS3ST1O14792 307 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 CHST1O43916 411 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 IGLV1-44P01699 117 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 IAPPP10997 89 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 KLF3P57682 345 aaPredicted RBP8.32□□□□□ -1.08
GGA3-221ENST00000614198 BSXQ3C1V8 233 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 CEACAM21Q3KPI0 293 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 FAM201AQ5SY85 155 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 TOMM20LQ6UXN7 152 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 ODF3L1Q8IXM7 274 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 TP53RKQ96S44 253 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 MAP1LC3BQ9GZQ8 125 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 NCOR1P1Q9H4R4 102 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 ZNF286AQ9HBT8 521 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 AADACP22760 399 aa8.32□□□□□ -1.08
GGA3-221ENST00000614198 FUT6P51993 359 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms