RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CYP2G1PQ6ZSU1 146 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 LHX4Q969G2 390 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 PARLQ9H300 379 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 OR1A1Q9P1Q5 309 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 ADGRG4Q8IZF6 3080 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 TRAV1-1A0A0B4J248 108 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 MBD3L4A6NDZ8 208 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-208ENST00000613073 MBD3L3A6NE82 208 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-208ENST00000613073 MBD3L5A6NJ08 208 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-208ENST00000613073 MBD3L2Q8NHZ7 208 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-208ENST00000613073 IGHV2OR16-5A0A0B4J2B6 119 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 A0A0G2JRQ6 117 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 A0A0U1RQK1 487 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 ZNF320A2RRD8 509 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 BAXQ07812 192 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 TCF23Q7RTU1 214 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 MRGPRGQ86SM5 289 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 VN1R17PQ8TDU5 208 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 ZCCHC14Q8WYQ9 949 aaKnown RBP13.79□□□□□ -0.2
CNOT3-208ENST00000613073 ERRFI1Q9UJM3 462 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-208ENST00000613073 TRAPPC2LQ9UL33 140 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 TRAPPC1Q9Y5R8 145 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 TUSC2O75896 110 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 IL6RP08887 468 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-208ENST00000613073 RAB7AP51149 207 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 ZNF83P51522 516 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 TMEM41BQ5BJD5 291 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 Q6ZR03 302 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 OR4F5Q8NH21 305 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 OR4F4Q96R69 305 aa13.79□□□□□ -0.2
CNOT3-208ENST00000613073 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
CNOT3-208ENST00000613073 KBTBD11O94819 623 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 EGR1P18146 543 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 CDKN1AP38936 164 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 MDH2P40926 338 aaKnown RBP13.78□□□□□ -0.2
CNOT3-208ENST00000613073 MEF2BQ02080 365 aaPredicted RBP13.78□□□□□ -0.2
CNOT3-208ENST00000613073 ID3Q02535 119 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 ARL16Q0P5N6 197 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 ZNF474Q6S9Z5 364 aaPredicted RBP13.78□□□□□ -0.2
CNOT3-208ENST00000613073 DPPA3Q6W0C5 159 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 Q6ZVH6 145 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 Q8IYB0 196 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 MIEN1Q9BRT3 115 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 PCNX1Q96RV3 2341 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 CRYABP02511 175 aaKnown RBP13.78□□□□□ -0.2
CNOT3-208ENST00000613073 CTXN2P0C2S0 81 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 IL3RAP26951 378 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 FOXC1Q12948 553 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 SLC25A22Q9H936 323 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 MANBALQ9NQG1 85 aa13.78□□□□□ -0.2
CNOT3-208ENST00000613073 SH2D1BO14796 132 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 IGLV1-44P01699 117 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 CHRNB4P30926 498 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 C11orf53Q8IXP5 236 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 P2RX4Q99571 388 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 TAAR3PQ9P1P4 343 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 DUSP13Q9UII6 198 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 ZGRF1Q86YA3 2104 aa13.77□□□□□ -0.2
CNOT3-208ENST00000613073 PSPNO60542 156 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 IFNA1P01562 189 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 GYPAP02724 150 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF718Q3SXZ3 478 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 Q6ZWC4 215 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 SLC25A15Q9Y619 301 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.77□□□□□ -0.21
CNOT3-208ENST00000613073 M0R1B8 84 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 HAND1O96004 215 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 DEFA4P12838 97 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF146Q15072 292 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 MMDQ15546 238 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 NMSQ5H8A3 153 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF497Q6ZNH5 498 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 OR51H1Q8NH63 302 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 OR2W1Q9Y3N9 320 aa13.77□□□□□ -0.21
CNOT3-208ENST00000613073 TRBV6-6A0A0A6YYG2 114 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 SRPXP78539 464 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 CMTM2Q8TAZ6 248 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 ABHD17AQ96GS6 310 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 TMEM56Q96MV1 263 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 RNF115Q9Y4L5 304 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 TMEM56-RWDD3S4R434 201 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 PGLYRP1O75594 196 aaPredicted RBP13.76□□□□□ -0.21
CNOT3-208ENST00000613073 IGKV1D-33P01593 117 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 IGKV1-33P01594 117 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 VDAC1P21796 283 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 RNF151Q2KHN1 245 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 C1orf185Q5T7R7 199 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 VHLLQ6RSH7 139 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF295-AS1Q8N0V1 137 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 MBD3L1Q8WWY6 194 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 VAMP8Q9BV40 100 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 CXXC4Q9H2H0 198 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 TUBG2Q9NRH3 451 aa13.76□□□□□ -0.21
CNOT3-208ENST00000613073 KALRNO60229 2985 aa13.75□□□□□ -0.21
CNOT3-208ENST00000613073 C1QTNF9BB2RNN3 333 aa13.75□□□□□ -0.21
CNOT3-208ENST00000613073 MSMPQ1L6U9 139 aa13.75□□□□□ -0.21
CNOT3-208ENST00000613073 CISD2Q8N5K1 135 aaKnown RBP13.75□□□□□ -0.21
CNOT3-208ENST00000613073 IMMP2LQ96T52 175 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms