RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 VAMP8Q9BV40 100 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 QTRT1Q9BXR0 403 aaKnown RBP8.1□□□□□ -1.11
TPM1-233ENST00000610733 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
TPM1-233ENST00000610733 FOXJ2Q9P0K8 574 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 DUXBA0A1W2PPF3 345 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 MT-CO2P00403 227 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 MYOD1P15172 320 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 CNN1P51911 297 aaKnown RBP8.1□□□□□ -1.11
TPM1-233ENST00000610733 SUMO1P63165 101 aaKnown RBP8.1□□□□□ -1.11
TPM1-233ENST00000610733 ID3Q02535 119 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 DCAF10Q5QP82 559 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 TRAT1Q6PIZ9 186 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 MOGAT3Q86VF5 341 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 DNASE2BQ8WZ79 361 aa8.1□□□□□ -1.11
TPM1-233ENST00000610733 CTXND1A0A1B0GTU2 59 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 C12orf77C9JDV5 145 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 RRHO14718 337 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 ZNF253O75346 499 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 IGKV1-5P01602 117 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 WDYHV1Q96HA8 205 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 NDUFAF3Q9BU61 184 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 IGHV3-72A0A0B4J1Y9 119 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 OR5B21A6NL26 309 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 OR4A8P0C604 315 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 CD1BP29016 333 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 RPL23P62829 140 aaKnown RBP8.09□□□□□ -1.11
TPM1-233ENST00000610733 RPL30P62888 115 aaKnown RBP8.09□□□□□ -1.11
TPM1-233ENST00000610733 Q0VFX4 171 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 GAGE1Q13065 139 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 TIGITQ495A1 244 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 ZNF766Q5HY98 468 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 GGNQ86UU5 652 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 ZCCHC24Q8N2G6 241 aaKnown RBP8.09□□□□□ -1.11
TPM1-233ENST00000610733 RBMXL3Q8N7X1 1067 aaKnown RBP8.09□□□□□ -1.11
TPM1-233ENST00000610733 OR10G8Q8NGN5 311 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 CORO2AQ92828 525 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 BORCS7Q96B45 105 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 SDF2L1Q9HCN8 221 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 MALRD1Q5VYJ5 2156 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 IGLV3-12A0A075B6K2 115 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 NDUFS8O00217 210 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 IL15RAQ13261 267 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 KCNMB1Q16558 191 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 DEFB109BQ30KR1 87 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 DNLZQ5SXM8 178 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
TPM1-233ENST00000610733 WNT10AQ9GZT5 417 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 TANC2Q9HCD6 1990 aa8.09□□□□□ -1.11
TPM1-233ENST00000610733 ASPMQ8IZT6 3477 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 MGAQ8IWI9 3026 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
TPM1-233ENST00000610733 SCO2A0A1W2PP80 73 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 LNP1A1A4G5 178 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 PSPNO60542 156 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 CA1P00915 261 aaPredicted RBP8.08□□□□□ -1.12
TPM1-233ENST00000610733 IGLV3-19P01714 112 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 AMBPP02760 352 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 GNB2P62879 340 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 RNASEKQ6P5S7 137 aaKnown RBP8.08□□□□□ -1.12
TPM1-233ENST00000610733 C17orf82Q86X59 251 aaPredicted RBP8.08□□□□□ -1.12
TPM1-233ENST00000610733 FAM19A2Q8N3H0 131 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 Q8NFD4 153 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 PPP1R35Q8TAP8 253 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 CLDN14O95500 239 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 HRASP01112 189 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 ORM2P19652 201 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 MPV17P39210 176 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 ZNF137PP52743 207 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 OR1L6Q8NGR2 347 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 TMEM208Q9BTX3 173 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 METRNQ9UJH8 293 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 MPC1Q9Y5U8 109 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 SMIM21Q3B7S5 101 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 ZNF718Q3SXZ3 478 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 BEND2Q8NDZ0 799 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 RNF24Q9Y225 148 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 KLF13Q9Y2Y9 288 aaPredicted RBP8.08□□□□□ -1.12
TPM1-233ENST00000610733 PPIAL4AQ9Y536 164 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 PXMP4Q9Y6I8 212 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 ARL2-SNX15V9GYD0 113 aa8.08□□□□□ -1.12
TPM1-233ENST00000610733 GGCTO75223 188 aaKnown RBP8.07□□□□□ -1.12
TPM1-233ENST00000610733 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
TPM1-233ENST00000610733 CEACAM1P13688 526 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 GNG4P50150 75 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 CCL8P80075 99 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 HIST3H3Q16695 136 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 NMSQ5H8A3 153 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 FBXW9Q5XUX1 488 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 OR13A1Q8NGR1 328 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 OR5P3Q8WZ94 311 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 VPS25Q9BRG1 176 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 WDR54Q9H977 334 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 ZNF331Q9NQX6 463 aaPredicted RBP8.07□□□□□ -1.12
TPM1-233ENST00000610733 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 NKX2-8O15522 239 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 TCF21O43680 179 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 HSBP1O75506 76 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 KBTBD11O94819 623 aa8.07□□□□□ -1.12
TPM1-233ENST00000610733 CRYBB3P26998 211 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms