RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TSPAN7P41732 249 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 DCAF10Q5QP82 559 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 FAM201AQ5SY85 155 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 KCNIP4Q6PIL6 250 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 TBX15Q96SF7 602 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 CD1BP29016 333 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 CATR1Q13166 79 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 COQ2Q96H96 371 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 SNHG12Q9BXW3 62 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 TMEM30CPA0ZSE6 113 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 SMPD2O60906 423 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 FOXH1O75593 365 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 ADMP35318 185 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 FBXW9Q5XUX1 488 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 M0R1X1 148 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 TIMM8AO60220 97 aaPredicted RBP17.03■□□□□ 0.32
SSBP3-216ENST00000610401 RAB4BP61018 213 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 HLA-DRB5Q30154 266 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 OR5R1Q8NH85 324 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 R3HDM4Q96D70 268 aa17.03■□□□□ 0.32
SSBP3-216ENST00000610401 INTS1Q8N201 2190 aaKnown RBP17.02■□□□□ 0.32
SSBP3-216ENST00000610401 HCFC1P51610 2035 aa17.02■□□□□ 0.32
SSBP3-216ENST00000610401 KITLGP21583 273 aa17.02■□□□□ 0.32
SSBP3-216ENST00000610401 SRSF7Q16629 238 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSBP3-216ENST00000610401 KLF14Q8TD94 323 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-216ENST00000610401 NDUFAF3Q9BU61 184 aa17.02■□□□□ 0.32
SSBP3-216ENST00000610401 LINC00470Q9BZP3 86 aa17.02■□□□□ 0.32
SSBP3-216ENST00000610401 RNF212BA8MTL3 300 aa17.02■□□□□ 0.31
SSBP3-216ENST00000610401 F6UZH7 168 aa17.02■□□□□ 0.31
SSBP3-216ENST00000610401 GATA2P23769 480 aaPredicted RBP17.02■□□□□ 0.31
SSBP3-216ENST00000610401 ZNF90Q03938 601 aa17.02■□□□□ 0.31
SSBP3-216ENST00000610401 RIF1Q5UIP0 2472 aaKnown RBP17.02■□□□□ 0.31
SSBP3-216ENST00000610401 YLPM1P49750 1951 aaKnown RBP17.02■□□□□ 0.31
SSBP3-216ENST00000610401 MDFIC2A0A1B0GVS7 189 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 TMEM250H0YL14 139 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 ZNF124Q15973 351 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 ACTL10Q5JWF8 245 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 MLNRO43193 412 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 ACOT6Q3I5F7 207 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-216ENST00000610401 BCL2L2Q92843 193 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-216ENST00000610401 PLXNB1O43157 2135 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 ZNF25P17030 456 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-216ENST00000610401 OR4A16Q8NH70 328 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 OCC1Q8TAD7 63 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 VN1R17PQ8TDU5 208 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 PKIBQ9C010 78 aa17.01■□□□□ 0.31
SSBP3-216ENST00000610401 A0A1W2PNU3 283 aaPredicted RBP17■□□□□ 0.31
SSBP3-216ENST00000610401 C15orf62A8K5M9 175 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 PMS2P5A8MQ11 134 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 CLDN14O95500 239 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 SSTP61278 116 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 FXYD3Q14802 87 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 MOB3BQ86TA1 216 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 ZNRF1Q8ND25 227 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 TRIB1Q96RU8 372 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 MS4A5Q9H3V2 200 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 GCM1Q9NP62 436 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 SPRR3Q9UBC9 169 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 PPIAL4AQ9Y536 164 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 SVEP1Q4LDE5 3571 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 CER1O95813 267 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 IER3P46695 156 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 GPR12P47775 334 aa17■□□□□ 0.31
SSBP3-216ENST00000610401 SEPSECSQ9HD40 501 aaKnown RBP17■□□□□ 0.31
SSBP3-216ENST00000610401 POLR3KQ9Y2Y1 108 aaPredicted RBP17■□□□□ 0.31
SSBP3-216ENST00000610401 FOXF2Q12947 444 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 DHRS13Q6UX07 377 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 DEFB108BQ8NET1 73 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 CDKN1AP38936 164 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 NHLRC2Q8NBF2 726 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 SFRP2Q96HF1 295 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 ARRDC1-AS1Q9H2J1 176 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 RYDENQ9NUL5 291 aaKnown RBP16.99■□□□□ 0.31
SSBP3-216ENST00000610401 ABI3Q9P2A4 366 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 C17orf112F2Z3M2 114 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 IQCJQ1A5X6 159 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 LINC00596Q86U02 117 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 BAGE3Q86Y29 109 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 BAGE2Q86Y30 109 aa16.99■□□□□ 0.31
SSBP3-216ENST00000610401 MBNL3Q9NUK0 354 aaKnown RBP16.99■□□□□ 0.31
SSBP3-216ENST00000610401 NBASA2RRP1 2371 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 TRBV6-6A0A0A6YYG2 114 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 TGOLN2O43493 480 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 IGHV3-48P01763 117 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 PRB4P10163 310 aaPredicted RBP16.98■□□□□ 0.31
SSBP3-216ENST00000610401 IGHV1-2P23083 117 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 TRA2AQ13595 282 aaKnown RBP eCLIP16.98■□□□□ 0.31
SSBP3-216ENST00000610401 MOB1BQ7L9L4 216 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 GBGT1Q8N5D6 347 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 NANOS1Q8WY41 292 aaKnown RBP16.98■□□□□ 0.31
SSBP3-216ENST00000610401 SAMD10Q9BYL1 202 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 SS18L1O75177 396 aaPredicted RBP16.98■□□□□ 0.31
SSBP3-216ENST00000610401 MRPL49Q13405 166 aaKnown RBP16.98■□□□□ 0.31
SSBP3-216ENST00000610401 ANAPC16Q96DE5 110 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 HSPB9Q9BQS6 159 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 ZNRD1Q9P1U0 126 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 PXMP4Q9Y6I8 212 aa16.98■□□□□ 0.31
SSBP3-216ENST00000610401 MBP02144 154 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 COX5BP10606 129 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 OR2Z1Q8NG97 314 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms