RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 VPS25Q9BRG1 176 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 GSX1Q9H4S2 264 aaPredicted RBP12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 ZNF319Q9P2F9 582 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 ARF6P62330 175 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 ZFP36L1Q07352 338 aaKnown RBP12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 QTRT1Q9BXR0 403 aaKnown RBP12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 RABAC1Q9UI14 185 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 CELA3BP08861 270 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 FREM3P0C091 2139 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 IGHV1-2P23083 117 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 GFI1Q99684 422 aa12.1□□□□□ -0.47
PCDHB16-201ENST00000609684 UCP1P25874 307 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 ACSF3Q4G176 576 aaPredicted RBP12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 OR4C13Q8NGP0 309 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 DICER1Q9UPY3 1922 aaKnown RBP12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 RNF222A6NCQ9 220 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 FAM201AQ5SY85 155 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 IBA57Q5T440 356 aaKnown RBP12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 OR10S1Q8NGN2 331 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 LYZL4Q96KX0 146 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 IGHV1-69-2A0A0G2JMI3 117 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 Q1RN00 199 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 ARTNQ5T4W7 220 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 WDR25Q64LD2 544 aaPredicted RBP12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 ZNF343Q6P1L6 599 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 TMEM116Q8NCL8 245 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 WDYHV1Q96HA8 205 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 PGPA6NDG6 321 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 REG1AP05451 166 aa12.09□□□□□ -0.47
PCDHB16-201ENST00000609684 TRAV14DV4A0A0A6YYC5 116 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 ZNF735P0CB33 412 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 MARVELD3Q96A59 401 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 RPRMQ9NS64 109 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 GPR179Q6PRD1 2367 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 AKAP6Q13023 2319 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 TGIF2-C20orf24A0A0A6YYL0 155 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 EFNA2O43921 213 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 TMEM186Q96B77 213 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 WBP1Q96G27 269 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 DNAJC4Q9NNZ3 241 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 IGHV2OR16-5A0A0B4J2B6 119 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 A8MWL6 223 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 LRRC75BQ2VPJ9 315 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 CLEC2AQ6UVW9 174 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 WFDC3Q8IUB2 231 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 C1orf162Q8NEQ5 155 aaPredicted RBP12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 OR13A1Q8NGR1 328 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 FBLN5Q9UBX5 448 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 ZSWIM8A7E2V4 1837 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 C8orf88P0DMB2 117 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 HTN1P15515 57 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 C17orf82Q86X59 251 aaPredicted RBP12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 MUC15Q8N387 334 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 VN1R17PQ8TDU5 208 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 GUCD1Q96NT3 240 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 KLHDC3Q9BQ90 382 aa12.08□□□□□ -0.48
PCDHB16-201ENST00000609684 ACACAQ13085 2346 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 M0R143 59 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 EAF1Q96JC9 268 aaPredicted RBP12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 GFRA3O60609 400 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 CCL1P22362 96 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 LINC01560Q8TB33 94 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 PSMG3Q9BT73 122 aaPredicted RBP12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 DCTN5Q9BTE1 182 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 PAQR4Q8N4S7 273 aaPredicted RBP12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 C9orf106Q8NAJ2 232 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 ELOVL5Q9NYP7 299 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 PAM16Q9Y3D7 125 aa12.07□□□□□ -0.48
PCDHB16-201ENST00000609684 CD40P25942 277 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 ZNF146Q15072 292 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 C1QTNF12Q5T7M4 302 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 BPIFA4PQ86YQ2 179 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 C17orf98A8MV24 154 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 J3QR89 54 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 LOXL3P58215 753 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 FAM216BQ8N7L0 139 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 CLEC7AQ9BXN2 247 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 PARLQ9H300 379 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 BET1LQ9NYM9 111 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 PINLYPA6NC86 204 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 NTN3O00634 580 aaPredicted RBP12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 NUBP1P53384 320 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 RCC1LQ96I51 464 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms