RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, human

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-208	ENST00000604743	RNASE12	Q5GAN4	147 aa	Known RBP	11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	ZNF66	Q6ZN08	573 aa		11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	VKORC1L1	Q8N0U8	176 aa		11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	TEX45	Q8NA69	505 aa		11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	OR5M8	Q8NGP6	311 aa		11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	MYOZ3	Q8TDC0	251 aa		11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	GIMAP1	Q8WWP7	306 aa		11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	ALX4	Q9H161	411 aa	Predicted RBP	11.21	□□□□□ -0.61
TUBE1-208	ENST00000604743	TG	P01266	2768 aa		11.21	□□□□□ -0.62
TUBE1-208	ENST00000604743	PRKDC	P78527	4128 aa	Known RBP	11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	DUS4L	O95620	317 aa	Known RBP	11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	IGHV3-11	P01762	117 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	SAA1	P0DJI8	122 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	TPPP2	P59282	170 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	TAS2R46	P59540	309 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	PRSS8	Q16651	343 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	OVCH2	Q7RTZ1	564 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR1N2	Q8NGR9	330 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR4S2	Q8NH73	311 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743	ANAPC10	Q9UM13	185 aa		11.2	□□□□□ -0.62
TUBE1-208	ENST00000604743		I3L521	148 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	SULT1C2	O00338	296 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	ACTL6B	O94805	426 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	TRGV3	P03979	118 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	NAT1	P18440	290 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	HRH1	P35367	487 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	DYRK1A	Q13627	763 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	MRGPRG-AS1	Q2M3A8	158 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	PYHIN1	Q6K0P9	492 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	ZNF818P	Q6ZRF7	136 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	SSX9	Q7RTT3	188 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	LYSMD2	Q8IV50	215 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	ZBTB34	Q8NCN2	500 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	GPX8	Q8TED1	209 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	DPF1	Q92782	380 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	MCRIP2	Q9BUT9	160 aa	Known RBP	11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	EXTL2	Q9UBQ6	330 aa		11.19	□□□□□ -0.62
TUBE1-208	ENST00000604743	MSGN1	A6NI15	193 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	MPPED1	O15442	326 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	RGS5	O15539	181 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	BRWD1-AS2	P59051	145 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	TSPAN5	P62079	268 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	DEFA5	Q01523	94 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	ZNF616	Q08AN1	781 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	CATR1	Q13166	79 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	DHRS11	Q6UWP2	260 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	SPAG16	Q8N0X2	631 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	POC5	Q8NA72	575 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR51H1	Q8NH63	302 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	MRAP	Q8TCY5	172 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	SRSF12	Q8WXF0	261 aa	Known RBP	11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	GPR61	Q9BZJ8	451 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	SCPEP1	Q9HB40	452 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	COA4	Q9NYJ1	87 aa		11.18	□□□□□ -0.62
TUBE1-208	ENST00000604743	RAMP3	O60896	148 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR2A4	O95047	310 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	GNRHR	P30968	328 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	KIR2DS2	P43631	304 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	RPL5	P46777	297 aa	Known RBP	11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	KRTAP10-11	P60412	298 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	RUNX1	Q01196	453 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	MSMO1	Q15800	293 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	C10orf55	Q5SWW7	151 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	ASPHD1	Q5U4P2	390 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	AADACL3	Q5VUY0	350 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	MMD2	Q8IY49	270 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR6F1	Q8NGZ6	308 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	RAB2B	Q8WUD1	216 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	MOB3A	Q96BX8	217 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR2A7	Q96R45	310 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	SLA2	Q9H6Q3	261 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	SCOC	Q9UIL1	159 aa		11.17	□□□□□ -0.62
TUBE1-208	ENST00000604743	IGHV4OR15-8	A0A075B7B6	117 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743		A0A087WW49	117 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	C13orf42	A0A1B0GVH6	325 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	CTDSP2	O14595	271 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	CREBL2	O60519	120 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	NOL3	O60936	208 aa	Known RBP	11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	HRAS	P01112	189 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	LGALS1	P09382	135 aa	Known RBP	11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR8U8	P0C7N1	319 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	RCVRN	P35243	200 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	SLURP1	P55000	103 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	FHL3	Q13643	280 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	REC114	Q7Z4M0	266 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	VSTM2A	Q8TAG5	236 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	RHOV	Q96L33	236 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	TMEM68	Q96MH6	324 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	FXYD6	Q9H0Q3	95 aa		11.16	□□□□□ -0.62
TUBE1-208	ENST00000604743	SEC14L6	B5MCN3	397 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	LINC01619	G3V211	115 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743		M0QYG6	137 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	KBTBD11	O94819	623 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	RLN1	P04808	185 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	RPA2	P15927	270 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	TMBIM6	P55061	237 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms