RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 ARPC1AQ92747 370 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 ARHGAP5-AS1Q96IT6 56 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 OR4C12Q96R67 309 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 CLCC1Q96S66 551 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 HDHD3Q9BSH5 251 aaPredicted RBP8.86□□□□□ -0.99
HIF3A-217ENST00000600236 PECRQ9BY49 303 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 FBXO7Q9Y3I1 522 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 NUBP2Q9Y5Y2 271 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 IGHV4OR15-8A0A075B7B6 117 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 A0A087WW49 117 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 TMEM272A0A1B0GTI8 110 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 TRDCB7Z8K6 153 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 SOX15O60248 233 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 SCGNO76038 276 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 HSPB1P04792 205 aaKnown RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 CD3GP09693 182 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 TRAPPC2P0DI81 140 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 TRAPPC2BP0DI82 140 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 SLURP1P55000 103 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 SSBP1Q04837 148 aaKnown RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 PSG5Q15238 335 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 C2orf76Q3KRA6 126 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 ZNF57Q68EA5 555 aaPredicted RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 DRAXINQ8NBI3 349 aaPredicted RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 LFNGQ8NES3 379 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 OR4A4PQ8NGN8 299 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 DLX4Q92988 240 aaPredicted RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 ASCL2Q99929 193 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 FAM103A1Q9BTL3 118 aaKnown RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 ELOVL1Q9BW60 279 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 PARP12Q9H0J9 701 aaKnown RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 ALX4Q9H161 411 aaPredicted RBP8.85□□□□□ -0.99
HIF3A-217ENST00000600236 DIABLOQ9NR28 239 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 ZNF355PQ9NSJ1 428 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 RDH8Q9NYR8 311 aa8.85□□□□□ -0.99
HIF3A-217ENST00000600236 FOXI3A8MTJ6 420 aaPredicted RBP8.84□□□□□ -0.99
HIF3A-217ENST00000600236 H3BUA1 57 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 M0R1X1 148 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 SULT1C2O00338 296 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 FCN1O00602 326 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 FABP7O15540 132 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 CNIH1O95406 144 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 IGHV3-11P01762 117 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 TRGV3P03979 118 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 BTCP35070 178 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 TMEM50BP56557 158 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 AP3S2P59780 193 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 TAGLNQ01995 201 aaKnown RBP8.84□□□□□ -0.99
HIF3A-217ENST00000600236 PLA2G7Q13093 441 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 FXYD3Q14802 87 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 ACSM6Q6P461 480 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 PLET1Q6UQ28 207 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 TOMM5Q8N4H5 51 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 ZNF383Q8NA42 475 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 OR10J5Q8NHC4 309 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 CASTOR1Q8WTX7 329 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 RAB3CQ96E17 227 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 TMEM68Q96MH6 324 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 MS4A10Q96PG2 267 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 MARVELD1Q9BSK0 173 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 AUNIPQ9H7T9 357 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 SCPEP1Q9HB40 452 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 RANGRFQ9HD47 186 aaPredicted RBP8.84□□□□□ -0.99
HIF3A-217ENST00000600236 SLC35D1Q9NTN3 355 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 COPZ2Q9P299 210 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 RAB22AQ9UL26 194 aa8.84□□□□□ -0.99
HIF3A-217ENST00000600236 MRPS7Q9Y2R9 242 aaKnown RBP8.84□□□□□ -0.99
HIF3A-217ENST00000600236 RBM7Q9Y580 266 aaKnown RBP8.84□□□□□ -0.99
HIF3A-217ENST00000600236 A0A0G2JLM5 398 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 C13orf42A0A1B0GVH6 325 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 LINC00854A0A1B0GVQ3 168 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 FAM240BA0A1B0GVZ2 78 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 ANKRD20A5PA0PJZ0 165 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 NAP1L6A6NFF2 107 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 CENPXA8MT69 81 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 C3orf84H3BNL1 204 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 SLC25A17O43808 307 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 DIRAS3O95661 229 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 IGKV1-16P04430 117 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 GSTT2BP0CG30 244 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 EGR2P11161 476 aaPredicted RBP8.83□□□□□ -1
HIF3A-217ENST00000600236 GP9P14770 177 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 ZP3P21754 424 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 LGALS7P47929 136 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 MOGAT2Q3SYC2 334 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 OR52I2Q8NH67 350 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 GRPEL2Q8TAA5 225 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 FCAMRQ8WWV6 532 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 RHOVQ96L33 236 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 OR2D2Q9H210 308 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 TPSG1Q9NRR2 321 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 MTFP1Q9UDX5 166 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 GAB2Q9UQC2 676 aa8.83□□□□□ -1
HIF3A-217ENST00000600236 METTL21EPA6NDL7 271 aa8.82□□□□□ -1
HIF3A-217ENST00000600236 BET1O15155 118 aa8.82□□□□□ -1
HIF3A-217ENST00000600236 RRASP10301 218 aa8.82□□□□□ -1
HIF3A-217ENST00000600236 ARL6IP1Q15041 203 aa8.82□□□□□ -1
HIF3A-217ENST00000600236 RTL8BQ17RB0 113 aa8.82□□□□□ -1
HIF3A-217ENST00000600236 PLAC9Q5JTB6 97 aa8.82□□□□□ -1
HIF3A-217ENST00000600236 GPX8Q8TED1 209 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms