RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 SAMD5Q5TGI4 173 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 AADACL3Q5VUY0 350 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 C18orf65Q6ZTR6 163 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 LHFPL1Q86WI0 220 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 ZNF491Q8N8L2 437 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 OR4S2Q8NH73 311 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 ZNF2Q9BSG1 426 aaPredicted RBP13.74□□□□□ -0.21
USHBP1-209ENST00000598570 PARP11Q9NR21 331 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 FAM212BQ9NTI7 297 aaPredicted RBP13.74□□□□□ -0.21
USHBP1-209ENST00000598570 PGLYRP1O75594 196 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-209ENST00000598570 RAB9AP51151 201 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 KLK9Q2XQG4 91 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 VMA21Q3ZAQ7 101 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 ASPHD1Q5U4P2 390 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 LINC00482Q8N8I6 264 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 TMEM229BQ8NBD8 167 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 OR5M8Q8NGP6 311 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 CD300LFQ8TDQ1 290 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 SMIM4Q8WVI0 70 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 FCAMRQ8WWV6 532 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 ARPC1AQ92747 370 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 RSRP1Q9BUV0 290 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 TAS2R8Q9NYW2 309 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 KLK9Q9UKQ9 250 aa13.73□□□□□ -0.21
USHBP1-209ENST00000598570 FOXA2Q9Y261 457 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-209ENST00000598570 DNAH3Q8TD57 4116 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 A0A1W2PRX2 142 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 H3BUA1 57 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 I3L521 148 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 GSTZ1O43708 216 aaPredicted RBP13.72□□□□□ -0.21
USHBP1-209ENST00000598570 SAA1P0DJI8 122 aaPredicted RBP13.72□□□□□ -0.21
USHBP1-209ENST00000598570 TNFSF8P32971 234 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 FHL3Q13643 280 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 PLGLAQ15195 96 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 PYHIN1Q6K0P9 492 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 LPCAT3Q6P1A2 487 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 ARRDC1Q8N5I2 433 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 TMEM167AQ8TBQ9 72 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 C4orf3Q8WVX3 66 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 GPHA2Q96T91 129 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 FXYD6Q9H0Q3 95 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 PLEKHA2Q9HB19 425 aa13.72□□□□□ -0.21
USHBP1-209ENST00000598570 RGS5O15539 181 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 WIPF1O43516 503 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 RAMP3O60896 148 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 NOL3O60936 208 aaKnown RBP13.71□□□□□ -0.21
USHBP1-209ENST00000598570 HERV-K104P61576 105 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 LCNL1Q6ZST4 164 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 MRPL41Q8IXM3 137 aaKnown RBP13.71□□□□□ -0.21
USHBP1-209ENST00000598570 LFNGQ8NES3 379 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 TCTEX1D2Q8WW35 142 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 RAX2Q96IS3 184 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 RHOVQ96L33 236 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 CLCC1Q96S66 551 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
USHBP1-209ENST00000598570 ZNF430Q9H8G1 570 aaPredicted RBP13.71□□□□□ -0.21
USHBP1-209ENST00000598570 RSL24D1Q9UHA3 163 aaKnown RBP13.71□□□□□ -0.21
USHBP1-209ENST00000598570 GPR31O00270 319 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 OR2A4O95047 310 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 HPRT1P00492 218 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 HRASP01112 189 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 CD3DP04234 171 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 ZNF735P0CB33 412 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 MAS1LP35410 378 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 TAS2R31P59538 309 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 FXYD4P59646 89 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 DGCR2P98153 550 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 BEAN1Q3B7T3 259 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 C8orf86Q6ZUL3 223 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 MMD2Q8IY49 270 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 SPAG16Q8N0X2 631 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 OR4A5Q8NH83 315 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 VSTM2AQ8TAG5 236 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 DIRAS2Q96HU8 199 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 OR2A7Q96R45 310 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 BET1LQ9NYM9 111 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 VSIG4Q9Y279 399 aa13.7□□□□□ -0.22
USHBP1-209ENST00000598570 CREBL2O60519 120 aaPredicted RBP13.69□□□□□ -0.22
USHBP1-209ENST00000598570 KBTBD11O94819 623 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 PF4V1P10720 104 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 F2RP25116 425 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 PTBP1P26599 531 aaKnown RBP eCLIP13.69□□□□□ -0.22
USHBP1-209ENST00000598570 CATR1Q13166 79 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 ZNF585BQ52M93 769 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 TMEM65Q6PI78 240 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 KLHL30-AS1Q8NEE0 82 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 MCFD2Q8NI22 146 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 FAM103A1Q9BTL3 118 aaKnown RBP13.69□□□□□ -0.22
USHBP1-209ENST00000598570 TINAGL1Q9GZM7 467 aaPredicted RBP13.69□□□□□ -0.22
USHBP1-209ENST00000598570 SLA2Q9H6Q3 261 aa13.69□□□□□ -0.22
USHBP1-209ENST00000598570 MSGN1A6NI15 193 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 CCL24O00175 119 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 TNFSF12O43508 249 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 TAS2R19P59542 299 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 RND3P61587 244 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 IDO2Q6ZQW0 420 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 TMEM17Q86X19 198 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 CMTM1Q8IZ96 169 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 SLC38A6Q8IZM9 456 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms