RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ACTBL2Q562R1 376 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 FOXB2Q5VYV0 432 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 MZT2AQ6P582 158 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 TMEM65Q6PI78 240 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 UNQ5815/PRO19632Q6UWF5 114 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF66Q6ZN08 573 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 TMEM17Q86X19 198 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 VKORC1L1Q8N0U8 176 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 TEX45Q8NA69 505 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 OR5H2Q8NGV7 314 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 DYNC2LI1Q8TCX1 351 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 RAB2BQ8WUD1 216 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 TCTEX1D2Q8WW35 142 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 RCC1LQ96I51 464 aaKnown RBP8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF2Q9BSG1 426 aaPredicted RBP8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 SLC5A7Q9GZV3 580 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 FXYD6Q9H0Q3 95 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 SCPEP1Q9HB40 452 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 PRELID3BQ9Y3B1 194 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 FAM25AB3EWG3 89 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 FAM25CB3EWG5 89 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 FAM25GB3EWG6 89 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 H3BMQ9 156 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 CTDSP2O14595 271 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 TAS2R46P59540 309 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 RUNX1Q01196 453 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 TMEM267Q0VDI3 215 aaPredicted RBP8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 C10orf55Q5SWW7 151 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 LAX1Q8IWV1 398 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 OR4S2Q8NH73 311 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 MOB3AQ96BX8 217 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 ISOC1Q96CN7 298 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 OR5B12Q96R08 314 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 ABHD1Q96SE0 405 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 BCL7BQ9BQE9 202 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 ALX4Q9H161 411 aaPredicted RBP8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 ZNF430Q9H8G1 570 aaPredicted RBP8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 EXTL2Q9UBQ6 330 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 VSIG4Q9Y279 399 aa8.52□□□□□ -1.05
SHKBP1-206ENST00000595523 SULT1C2O00338 296 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 CNIH1O95406 144 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 APELAP0DMC3 54 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 RCVRNP35243 200 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 KRTAP10-11P60412 298 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 HERV-K104P61576 105 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 TNXAQ16473 311 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 RNASE12Q5GAN4 147 aaKnown RBP8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 PUSL1Q8N0Z8 303 aaKnown RBP8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 OR11H1Q8NG94 326 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 OR5M8Q8NGP6 311 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 OR52I2Q8NH67 350 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 SRSF12Q8WXF0 261 aaKnown RBP8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 MS4A10Q96PG2 267 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 DCUN1D5Q9BTE7 237 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 CCDC59Q9P031 241 aaKnown RBP8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 KLK11Q9UBX7 282 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 CEPT1Q9Y6K0 416 aa8.51□□□□□ -1.05
SHKBP1-206ENST00000595523 A0A1B0GW64 132 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 MSGN1A6NI15 193 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 RBFOX2O43251 390 aaKnown RBP eCLIP8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 RBMXL2O75526 392 aaKnown RBP8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 KBTBD11O94819 623 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 KIR2DS2P43631 304 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 DEFA5Q01523 94 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 PYHIN1Q6K0P9 492 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 SPAG16Q8N0X2 631 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 POC5Q8NA72 575 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 OR5T1Q8NG75 326 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 OR51H1Q8NH63 302 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 TMEM167AQ8TBQ9 72 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 RHOVQ96L33 236 aa8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 SLIRPQ9GZT3 109 aaKnown RBP8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 AURKAIP1Q9NWT8 199 aaPredicted RBP8.5□□□□□ -1.05
SHKBP1-206ENST00000595523 TEX22C9J3V5 150 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 E7EUB6 86 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 H3BUA1 57 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 M0QYG6 137 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 RGS5O15539 181 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 PGLYRP1O75594 196 aaPredicted RBP8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 TPPPO94811 219 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 OR2A4O95047 310 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 DUS4LO95620 317 aaKnown RBP8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 IGHV3-11P01762 117 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 TRGV3P03979 118 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 RLN1P04808 185 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 LGALS1P09382 135 aaKnown RBP8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 MYOD1P15172 320 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 HOXD3P31249 432 aaPredicted RBP8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 RAB25P57735 213 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 TPPP2P59282 170 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 DGCR2P98153 550 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 EGFEM1PQ0D2K5 195 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 VAX1Q5SQQ9 334 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 AADACL3Q5VUY0 350 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 SSX9Q7RTT3 188 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 MMD2Q8IY49 270 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 ADAD2Q8NCV1 583 aaKnown RBP8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 OR1N2Q8NGR9 330 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 OR6F1Q8NGZ6 308 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms