RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CDS2O95674 445 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 CA6P23280 308 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 S100A7P31151 101 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 FGF12P61328 243 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 RHOGP84095 191 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 KRTCAP3Q53RY4 240 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 KCNIP4Q6PIL6 250 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 Q6ZPA2 131 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 ODF3L1Q8IXM7 274 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 FAM57AQ8TBR7 257 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 ABHD14BQ96IU4 210 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 CST9LQ9H4G1 147 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 MPC1Q9Y5U8 109 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 PIEZO2Q9H5I5 2752 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 PRR14LQ5THK1 2151 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A18PA6NE21 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A16PA6NEW6 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A20PA6NIJ5 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A8PA6NJQ4 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A22PA8MWA6 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A12PA8MX19 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A5PA8MXJ8 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A15PP0C7V4 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A13PP0C7W8 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A14PP0C7W9 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 FAM90A24PP0C7X0 464 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 IGLC2P0DOY2 106 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 IGLC3P0DOY3 106 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 IL3RAP26951 378 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 ABCA11PQ4W5N1 156 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 UNQ5815/PRO19632Q6UWF5 114 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 BHLHA15Q7RTS1 189 aaPredicted RBP12.9□□□□□ -0.34
PNKP-204ENST00000594661 SLC25A40Q8TBP6 338 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 RTN4IP1Q8WWV3 396 aaPredicted RBP12.9□□□□□ -0.34
PNKP-204ENST00000594661 GPR146Q96CH1 333 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 SMIM12Q96EX1 92 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 IL36RNQ9UBH0 155 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 TRAPPC1Q9Y5R8 145 aa12.9□□□□□ -0.34
PNKP-204ENST00000594661 CEBPZOSA8MTT3 80 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 SYNGR1O43759 233 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 IFNA1P01562 189 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 AADACP22760 399 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 OMGP23515 440 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 HNRNPA3P51991 378 aaKnown RBP12.89□□□□□ -0.35
PNKP-204ENST00000594661 CLEC12BQ2HXU8 276 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 ALKBH6Q3KRA9 238 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 TMEM41BQ5BJD5 291 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 ATP5SQ99766 215 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 HSPB9Q9BQS6 159 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 CECR9P0C854 216 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 TNFSF4P23510 183 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
PNKP-204ENST00000594661 LINC00310P59036 64 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 ZNF474Q6S9Z5 364 aaPredicted RBP12.89□□□□□ -0.35
PNKP-204ENST00000594661 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 C1orf174Q8IYL3 243 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 Q8N976 141 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
PNKP-204ENST00000594661 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
PNKP-204ENST00000594661 HSPB6O14558 160 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 HYPMO75409 117 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 TIMP3P35625 211 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 ZNF726P1Q15940 193 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 LDLRAD2Q5SZI1 272 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 ZNF709Q8N972 641 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 ESPL1Q14674 2120 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 IGLV1-44P01699 117 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 MPV17P39210 176 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 HERV-K104P61576 105 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 GNG3P63215 75 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 SPATA45Q537H7 98 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 Q6ZN92 141 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 Q6ZVH6 145 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 RPRMQ9NS64 109 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 BET1LQ9NYM9 111 aa12.88□□□□□ -0.35
PNKP-204ENST00000594661 SHANK1Q9Y566 2161 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 IGHV1-18A0A0C4DH31 117 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 DUXBA0A1W2PPF3 345 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 TMEM250H0YL14 139 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 NKX2-1P43699 371 aaPredicted RBP12.87□□□□□ -0.35
PNKP-204ENST00000594661 PSG7Q13046 419 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 WDR86Q86TI4 376 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 OR5AU1Q8NGC0 362 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 MRPL27Q9P0M9 148 aaKnown RBP12.87□□□□□ -0.35
PNKP-204ENST00000594661 RBM7Q9Y580 266 aaKnown RBP12.87□□□□□ -0.35
PNKP-204ENST00000594661 PTPRQQ9UMZ3 2332 aa12.87□□□□□ -0.35
PNKP-204ENST00000594661 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 GLI4P10075 376 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 ARF6P62330 175 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 KLF14Q8TD94 323 aaPredicted RBP12.86□□□□□ -0.35
PNKP-204ENST00000594661 TXN2Q99757 166 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms