RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 TMEM268Q5VZI3 342 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 ZNF695Q8IW36 515 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 LGI3Q8N145 548 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 TMEM86BQ8N661 226 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 COQ8AQ8NI60 647 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 LHFPL5Q8TAF8 219 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 PIFOQ8TCI5 191 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 ZNF418Q8TF45 676 aaPredicted RBP8.68□□□□□ -1.02
USE1-204ENST00000594399 MITD1Q8WV92 249 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 RBPMSQ93062 196 aaKnown RBP8.68□□□□□ -1.02
USE1-204ENST00000594399 IL22RA2Q969J5 263 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 R3HDM4Q96D70 268 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 RBMXL1Q96E39 390 aaKnown RBP8.68□□□□□ -1.02
USE1-204ENST00000594399 TMEM56Q96MV1 263 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 TSNAXQ99598 290 aaKnown RBP8.68□□□□□ -1.02
USE1-204ENST00000594399 PHB2Q99623 299 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 RNF5Q99942 180 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 AIFM2Q9BRQ8 373 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 VPREB3Q9UKI3 123 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 POMT1Q9Y6A1 747 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 TMEM56-RWDD3S4R434 201 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 A0A0B4J293 547 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 C7orf66A4D0T2 115 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 A6NDX4 124 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 DNAJC9-AS1A6NH13 148 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 MARCH11A6NNE9 402 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 SNRPGP15A8MWD9 76 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 NBR2O15453 112 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 OR2F2O95006 317 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 CDS2O95674 445 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 IGKV1-39P01597 117 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 IGKV1D-39P04432 117 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 SAA1P0DJI8 122 aaPredicted RBP8.67□□□□□ -1.02
USE1-204ENST00000594399 LGALS7P47929 136 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 AKR1C2P52895 323 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 HNF4GQ14541 408 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 LY6EQ16553 131 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 VMA21Q3ZAQ7 101 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 TMEM219Q86XT9 240 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 SLC35G3Q8N808 338 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 OR8H1Q8NGG4 311 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 RNASE11Q8TAA1 199 aaKnown RBP8.67□□□□□ -1.02
USE1-204ENST00000594399 SLC25A33Q9BSK2 321 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 C1RLQ9NZP8 487 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 KIAA1456Q9P272 454 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 ALG5Q9Y673 324 aa8.67□□□□□ -1.02
USE1-204ENST00000594399 A0A0A6YYJ9 748 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 A0A0B4J2A0 478 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 DUXBA0A1W2PPF3 345 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 RRHO14718 337 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 NDUFA3O95167 84 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 KRASP01116 189 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 IGLV2-23P01705 113 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 CNTFRP26992 372 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 G6PCP35575 357 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 UBE2KP61086 200 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 POU2AF1Q16633 256 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 OR4A47Q6IF82 309 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 LIN54Q6MZP7 749 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 SSX9Q7RTT3 188 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 C16orf82Q7Z2V1 217 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 SELENOHQ8IZQ5 122 aaKnown RBP8.66□□□□□ -1.02
USE1-204ENST00000594399 VKORC1L1Q8N0U8 176 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 DMBX1Q8NFW5 382 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 NPBQ8NG41 125 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 VSTM2AQ8TAG5 236 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 RRNAD1Q96FB5 475 aaKnown RBP8.66□□□□□ -1.02
USE1-204ENST00000594399 SEC22AQ96IW7 307 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 RITA1Q96K30 269 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 RHOVQ96L33 236 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 RBM14Q96PK6 669 aaKnown RBP8.66□□□□□ -1.02
USE1-204ENST00000594399 TNFRSF19Q9NS68 423 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 SHPKQ9UHJ6 478 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 MOB4Q9Y3A3 225 aa8.66□□□□□ -1.02
USE1-204ENST00000594399 STAB1Q9NY15 2570 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 NCBP2LA6PVI3 153 aaKnown RBP8.65□□□□□ -1.02
USE1-204ENST00000594399 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.02
USE1-204ENST00000594399 CLDN34H7C241 214 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 M0QZK8 103 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 SLC25A17O43808 307 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 CHST1O43916 411 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 OR2A4O95047 310 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 IGKV1-5P01602 117 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 VDAC1P21796 283 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 F2RL1P55085 397 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 HILS1P60008 231 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 PLGLAQ15195 96 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 PSG5Q15238 335 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 H2BFWTQ7Z2G1 175 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 FAM219AQ8IW50 185 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 PUSL1Q8N0Z8 303 aaKnown RBP8.65□□□□□ -1.02
USE1-204ENST00000594399 C12orf45Q8N5I9 185 aaPredicted RBP8.65□□□□□ -1.02
USE1-204ENST00000594399 OR2A7Q96R45 310 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 JMJD8Q96S16 334 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 CHIAQ9BZP6 476 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 OR51J1Q9H342 316 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 FBXL15Q9H469 300 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms