RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 LPCAT3Q6P1A2 487 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 IDO2Q6ZQW0 420 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 SSX9Q7RTT3 188 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 SPAG16Q8N0X2 631 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 MINDY2Q8NBR6 621 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 OR5T1Q8NG75 326 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 OR5M8Q8NGP6 311 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 OR51H1Q8NH63 302 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 VSTM2AQ8TAG5 236 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 DPF1Q92782 380 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 DIRAS2Q96HU8 199 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 DUX3Q96PT4 197 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 OR5B12Q96R08 314 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 GPHA2Q96T91 129 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 KLK15Q9H2R5 256 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 CCDC59Q9P031 241 aaKnown RBP7.88□□□□□ -1.15
BRCA1-227ENST00000591849 ANAPC10Q9UM13 185 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 FBXO7Q9Y3I1 522 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 MSGN1A6NI15 193 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 ARPC1BO15143 372 aaKnown RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 TPPPO94811 219 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 OR2A4O95047 310 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 TRGV3P03979 118 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 SAA1P0DJI8 122 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 EGR2P11161 476 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 PGAM2P15259 253 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 IGLL1P15814 213 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 PPIFP30405 207 aaKnown RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 CRIP2P52943 208 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 TPPP2P59282 170 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 IL18Q14116 193 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 PRSS8Q16651 343 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 RNASE10Q5GAN6 216 aaKnown RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 LYSMD2Q8IV50 215 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 LAX1Q8IWV1 398 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 MRPL41Q8IXM3 137 aaKnown RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 MMD2Q8IY49 270 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 WFDC9Q8NEX5 89 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 OR52I2Q8NH67 350 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 DYNC2LI1Q8TCX1 351 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 CD300LFQ8TDQ1 290 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 CASTOR1Q8WTX7 329 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 C4orf3Q8WVX3 66 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 MOB3AQ96BX8 217 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 ISOC1Q96CN7 298 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 UBE2E2Q96LR5 201 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 TMEM68Q96MH6 324 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 OR2A7Q96R45 310 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 MCRIP2Q9BUT9 160 aaKnown RBP7.87□□□□□ -1.15
BRCA1-227ENST00000591849 GPR61Q9BZJ8 451 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 HRASLSQ9HDD0 168 aa7.87□□□□□ -1.15
BRCA1-227ENST00000591849 C13orf42A0A1B0GVH6 325 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 DPPA5A6NC42 116 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 H3BMQ9 156 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 M0QYG6 137 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 GPR31O00270 319 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 PGLYRP1O75594 196 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-227ENST00000591849 DUS4LO95620 317 aaKnown RBP7.86□□□□□ -1.15
BRCA1-227ENST00000591849 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 IGLV2-14P01704 120 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 CRYGBP07316 175 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 GNRHRP30968 328 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 ERVK-16P61578 105 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 MRPS10P82664 201 aaKnown RBP7.86□□□□□ -1.15
BRCA1-227ENST00000591849 DEFB136Q30KP8 78 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 ZNF818PQ6ZRF7 136 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 VKORC1L1Q8N0U8 176 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 ZNF491Q8N8L2 437 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 DMBX1Q8NFW5 382 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 OR1N2Q8NGR9 330 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 MCFD2Q8NI22 146 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 RAX2Q96IS3 184 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 RHOVQ96L33 236 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 SPIN2AQ99865 258 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 SPIN2BQ9BPZ2 258 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 MIXL1Q9H2W2 232 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 SLA2Q9H6Q3 261 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 COA4Q9NYJ1 87 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 RABL2AQ9UBK7 228 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-227ENST00000591849 KLK11Q9UBX7 282 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 RABL2BQ9UNT1 228 aa7.86□□□□□ -1.15
BRCA1-227ENST00000591849 PRKDCP78527 4128 aaKnown RBP7.86□□□□□ -1.15
BRCA1-227ENST00000591849 GABARAPH6UMI1 98 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 HPRT1P00492 218 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 IGHV3-11P01762 117 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 RLN1P04808 185 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 APELAP0DMC3 54 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 TBPP20226 339 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 TAS2R19P59542 299 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 EIF4EBP1Q13541 118 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-227ENST00000591849 PHLDA2Q53GA4 152 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 SAMD5Q5TGI4 173 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 SLC25A42Q86VD7 318 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 LINC00482Q8N8I6 264 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 OR11H1Q8NG94 326 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 SRSF12Q8WXF0 261 aaKnown RBP7.85□□□□□ -1.15
BRCA1-227ENST00000591849 FYTTD1Q96QD9 318 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms