RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SMIM8Q96KF7 97 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 WNT5BQ9H1J7 359 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 RALYQ9UKM9 306 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 COX6CP09669 75 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 MAS1LP35410 378 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 TWIST1Q15672 202 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM78Q5T7P6 136 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF385CQ66K41 422 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 PSMG3Q9BT73 122 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 AURKAIP1Q9NWT8 199 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF256Q9Y2P7 627 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 INTS1Q8N201 2190 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 PIN1P1O15428 100 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 RPL8P62917 257 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 C10orf128Q5T292 105 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 Q96M66 194 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 AMELYQ99218 206 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 IDI2-AS1Q9NZ38 188 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 DMRT1Q9Y5R6 373 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 LOC390937A0A1W2PQ73 354 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 ODAMA1E959 279 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 E9PLN8 166 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 KBTBD11O94819 623 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 PMCHL2Q9BQD1 86 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 EFEMP2O95967 443 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 SCTP09683 121 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 DDTP30046 118 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 OR4A47Q6IF82 309 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM54Q969K7 222 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 SPSB4Q96A44 273 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 RHOVQ96L33 236 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 LHFPL6Q9Y693 200 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 NYNRINQ9P2P1 1898 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 PATJQ8NI35 1801 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 GAGE10A6NGK3 116 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 NMUP48645 174 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 TBR1Q16650 682 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 OR1N2Q8NGR9 330 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 FAM216AQ8WUB2 273 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 MRPL18Q9H0U6 180 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 TLNRD1Q9H1K6 362 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 IL36RNQ9UBH0 155 aa11.37□□□□□ -0.59
SMARCA4-216ENST00000591545 PQLC2LA1A4F0 135 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 HSPE1P61604 102 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 WFDC3Q8IUB2 231 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 FGFRL1Q8N441 504 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 POC1AQ8NBT0 407 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 MRPL32Q9BYC8 188 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM140Q9NV12 185 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 JPT1Q9UK76 154 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 A0A0B4J293 547 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 A0A1W2PS18 150 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 LEPROTL1O95214 131 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 RND3P61587 244 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 CXorf66Q5JRM2 361 aaPredicted RBP11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 OR4A5Q8NH83 315 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 OR9G1Q8NH87 305 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 DCTN5Q9BTE1 182 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 C5orf66Q9H5L9 145 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 CALYQ9NYX4 217 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 OR4C46A6NHA9 309 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM250H0YL14 139 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 C8orf88P0DMB2 117 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 AGAP20933 346 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 H2BFSP57053 126 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 RAB37Q96AX2 223 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 METTL1Q9UBP6 276 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 SPTBP11277 2137 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 RTTNQ86VV8 2226 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 LOC105371267A0A1B0GV96 52 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM8BA6NDV4 472 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 SIAH2O43255 324 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 GLIPR1P48060 266 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 SOSTQ9BQB4 213 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 CLEC7AQ9BXN2 247 aa11.36□□□□□ -0.59
SMARCA4-216ENST00000591545 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 A0A1W2PP11 408 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNHIT1O43257 154 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 KCNAB3O43448 404 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 APELAP0DMC3 54 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 G6PC2Q9NQR9 355 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 DLL3Q9NYJ7 618 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 EP400Q96L91 3159 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 H3BVH4 76 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 C1QL1O75973 258 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 VENTXO95231 258 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 FOLR2P14207 255 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 KLK2P20151 261 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms