RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 DEFB136Q30KP8 78 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 VMA21Q3ZAQ7 101 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 KPRPQ5T749 579 aaPredicted RBP7.16□□□□□ -1.26
DNMT1-223ENST00000591239 UNQ5815/PRO19632Q6UWF5 114 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 IDO2Q6ZQW0 420 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 TMEM17Q86X19 198 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF491Q8N8L2 437 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 ZBTB34Q8NCN2 500 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 OR5H2Q8NGV7 314 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 OR4S2Q8NH73 311 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 CASTOR1Q8WTX7 329 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 C4orf3Q8WVX3 66 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 RCC1LQ96I51 464 aaKnown RBP7.16□□□□□ -1.26
DNMT1-223ENST00000591239 UBE2E2Q96LR5 201 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 DUX3Q96PT4 197 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 P2RX4Q99571 388 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 BCL7BQ9BQE9 202 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 ADAM30Q9UKF2 790 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 VSIG4Q9Y279 399 aa7.16□□□□□ -1.26
DNMT1-223ENST00000591239 RGS5O15539 181 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 WIPF1O43516 503 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 DUS4LO95620 317 aaKnown RBP7.15□□□□□ -1.26
DNMT1-223ENST00000591239 SAA1P0DJI8 122 aaPredicted RBP7.15□□□□□ -1.26
DNMT1-223ENST00000591239 CD40LGP29965 261 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 GNRHRP30968 328 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 RCVRNP35243 200 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 KIR2DS2P43631 304 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 PRSS8Q16651 343 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 PDLIM3Q53GG5 364 aaPredicted RBP7.15□□□□□ -1.26
DNMT1-223ENST00000591239 PYHIN1Q6K0P9 492 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF818PQ6ZRF7 136 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 VKORC1L1Q8N0U8 176 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 OR5M8Q8NGP6 311 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 OR6F1Q8NGZ6 308 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 DYNC2LI1Q8TCX1 351 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF2Q9BSG1 426 aaPredicted RBP7.15□□□□□ -1.26
DNMT1-223ENST00000591239 GNB4Q9HAV0 340 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 PLA2G2EQ9NZK7 142 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 EXTL2Q9UBQ6 330 aa7.15□□□□□ -1.26
DNMT1-223ENST00000591239 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
DNMT1-223ENST00000591239 MSGN1A6NI15 193 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 I3L521 148 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 CTDSP2O14595 271 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 CREBL2O60519 120 aaPredicted RBP7.14□□□□□ -1.27
DNMT1-223ENST00000591239 RAMP3O60896 148 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 NOL3O60936 208 aaKnown RBP7.14□□□□□ -1.27
DNMT1-223ENST00000591239 TPPPO94811 219 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 TNCP24821 2201 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 RAB25P57735 213 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 RUNX1Q01196 453 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 TNXAQ16473 311 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 ASPHD1Q5U4P2 390 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 LAX1Q8IWV1 398 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 OR5T1Q8NG75 326 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 OR11H1Q8NG94 326 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 BORCS5Q969J3 196 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 MOB3AQ96BX8 217 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 ISOC1Q96CN7 298 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 RHOVQ96L33 236 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 TMEM68Q96MH6 324 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 MS4A10Q96PG2 267 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 OR5B12Q96R08 314 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 ABHD1Q96SE0 405 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 MIXL1Q9H2W2 232 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 ZNF430Q9H8G1 570 aaPredicted RBP7.14□□□□□ -1.27
DNMT1-223ENST00000591239 CCDC59Q9P031 241 aaKnown RBP7.14□□□□□ -1.27
DNMT1-223ENST00000591239 KLK11Q9UBX7 282 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 SCOCQ9UIL1 159 aa7.14□□□□□ -1.27
DNMT1-223ENST00000591239 H3BMQ9 156 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 RBFOX2O43251 390 aaKnown RBP eCLIP7.13□□□□□ -1.27
DNMT1-223ENST00000591239 ACTL6BO94805 426 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 OR2A4O95047 310 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 HRASP01112 189 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
DNMT1-223ENST00000591239 APELAP0DMC3 54 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 TPPP2P59282 170 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 TSPAN5P62079 268 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 ZNF616Q08AN1 781 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 CATR1Q13166 79 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 FHL3Q13643 280 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 RNASE12Q5GAN4 147 aaKnown RBP7.13□□□□□ -1.27
DNMT1-223ENST00000591239 FOXB2Q5VYV0 432 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 MMD2Q8IY49 270 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 SPAG16Q8N0X2 631 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 POC5Q8NA72 575 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 OR51H1Q8NH63 302 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 OR52I2Q8NH67 350 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 VSTM2AQ8TAG5 236 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 CD300LFQ8TDQ1 290 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 C15orf40Q8WUR7 153 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 SRSF12Q8WXF0 261 aaKnown RBP7.13□□□□□ -1.27
DNMT1-223ENST00000591239 OR2A7Q96R45 310 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 CITED4Q96RK1 184 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 PHB2Q99623 299 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 AIFM2Q9BRQ8 373 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 MCRIP2Q9BUT9 160 aaKnown RBP7.13□□□□□ -1.27
DNMT1-223ENST00000591239 SLA2Q9H6Q3 261 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 ZNF355PQ9NSJ1 428 aa7.13□□□□□ -1.27
DNMT1-223ENST00000591239 H3BUA1 57 aa7.12□□□□□ -1.27
DNMT1-223ENST00000591239 M0QYG6 137 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms