RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 A0A1B0GVG6 124 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 SHOXO15266 292 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 IFNA21P01568 189 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 ERVK-16P61578 105 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 RRAS2P62070 204 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-211ENST00000590239 RPS16P62249 146 aaKnown RBP12.16□□□□□ -0.46
DDX39A-211ENST00000590239 LYZL2Q7Z4W2 148 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 FAM219AQ8IW50 185 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 LSM10Q969L4 123 aaKnown RBP12.16□□□□□ -0.46
DDX39A-211ENST00000590239 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
DDX39A-211ENST00000590239 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-211ENST00000590239 RHOVQ96L33 236 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 HARBI1Q96MB7 349 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 SSX3Q99909 188 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 MMP24Q9Y5R2 645 aa12.16□□□□□ -0.46
DDX39A-211ENST00000590239 hCG_2014768A0A024R1R8 64 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 SPDEFO95238 335 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 KRASP01116 189 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 IGKV1-5P01602 117 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 P0C879 139 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 SULT1A3P0DMM9 295 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 SULT1A4P0DMN0 295 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 G6PCP35575 357 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 AKR1C2P52895 323 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 HES1Q14469 280 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 NMSQ5H8A3 153 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 Q8N6K4 173 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 OR8H1Q8NGG4 311 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 PIFOQ8TCI5 191 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 C22orf15Q8WYQ4 148 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 MXRA5Q9NR99 2828 aa12.15□□□□□ -0.46
DDX39A-211ENST00000590239 HIVEP2P31629 2446 aa12.15□□□□□ -0.47
DDX39A-211ENST00000590239 SONP18583 2426 aaKnown RBP12.14□□□□□ -0.47
DDX39A-211ENST00000590239 HMX3A6NHT5 357 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
DDX39A-211ENST00000590239 ADAP1O75689 374 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 HOXB5P09067 269 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 TMEM11P17152 192 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 CD24P25063 80 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 UBE2KP61086 200 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 GGNBP1Q5YKI7 109 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 Q6YL49 198 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 H2BFWTQ7Z2G1 175 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 DMBX1Q8NFW5 382 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 NPBQ8NG41 125 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 OR5R1Q8NH85 324 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
DDX39A-211ENST00000590239 CHAC2Q8WUX2 184 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 RITA1Q96K30 269 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 GSX1Q9H4S2 264 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-211ENST00000590239 MGAT4CQ9UBM8 478 aa12.14□□□□□ -0.47
DDX39A-211ENST00000590239 A0A1B0GU03 582 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 MDFIC2A0A1B0GVS7 189 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 H3BUX3 64 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 IL6RP08887 468 aaPredicted RBP12.13□□□□□ -0.47
DDX39A-211ENST00000590239 TRAPPC2P0DI81 140 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 TRAPPC2BP0DI82 140 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 SLC25A6P12236 298 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 IER3P46695 156 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 BCAP31P51572 246 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 HNF4GQ14541 408 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 PSG5Q15238 335 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 FCN2Q15485 313 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 C2orf68Q2NKX9 166 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 OR4A47Q6IF82 309 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 PUSL1Q8N0Z8 303 aaKnown RBP12.13□□□□□ -0.47
DDX39A-211ENST00000590239 TEX45Q8NA69 505 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 VSTM2AQ8TAG5 236 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 SSMEM1Q8WWF3 244 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 RBMXL1Q96E39 390 aaKnown RBP12.13□□□□□ -0.47
DDX39A-211ENST00000590239 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
DDX39A-211ENST00000590239 SPIN2AQ99865 258 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 SPIN2BQ9BPZ2 258 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 TMEM140Q9NV12 185 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 PITPNC1Q9UKF7 332 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 TCF19Q9Y242 345 aa12.13□□□□□ -0.47
DDX39A-211ENST00000590239 A6NDX4 124 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 GOSR2O14653 212 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 NBR2O15453 112 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 OR2A4O95047 310 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 FGF2P09038 288 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-211ENST00000590239 SRD5A1P18405 259 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 GSG1LQ6UXU4 331 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 OR11H7Q8NGC8 314 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 GPR146Q96CH1 333 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 PLSCR3Q9NRY6 295 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms