RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TCTEX1D1	Q8N7M0	179 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	GRPEL2	Q8TAA5	225 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	RAB2B	Q8WUD1	216 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	TCTEX1D2	Q8WW35	142 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	AP3S1	Q92572	193 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	MOB3A	Q96BX8	217 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	UBE2E2	Q96LR5	201 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	FXYD6	Q9H0Q3	95 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	CEPT1	Q9Y6K0	416 aa		13.43	□□□□□ -0.26
MBD1-221	ENST00000589867	SMIM31	A0A1B0GVY4	71 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867		H3BMQ9	156 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	SULT1C2	O00338	296 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	RUNX1	Q01196	453 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	ACTBL2	Q562R1	376 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	FOXB2	Q5VYV0	432 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	TMEM17	Q86X19	198 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	LAX1	Q8IWV1	398 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	ZBTB34	Q8NCN2	500 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	OR5H2	Q8NGV7	314 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	OR52I2	Q8NH67	350 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	ABHD5	Q8WTS1	349 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	BCL7B	Q9BQE9	202 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	ALX4	Q9H161	411 aa	Predicted RBP	13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	EXTL2	Q9UBQ6	330 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867	PRELID3B	Q9Y3B1	194 aa		13.42	□□□□□ -0.26
MBD1-221	ENST00000589867		A0A1B0GW64	132 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	FAM25A	B3EWG3	89 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	FAM25C	B3EWG5	89 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	FAM25G	B3EWG6	89 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	RBMXL2	O75526	392 aa	Known RBP	13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	TAS2R46	P59540	309 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	CBX3	Q13185	183 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	VMA21	Q3ZAQ7	101 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	C10orf55	Q5SWW7	151 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	PUSL1	Q8N0Z8	303 aa	Known RBP	13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	ISOC1	Q96CN7	298 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	RCC1L	Q96I51	464 aa	Known RBP	13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	OR5B12	Q96R08	314 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	SLIRP	Q9GZT3	109 aa	Known RBP	13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	KLK11	Q9UBX7	282 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867	VSIG4	Q9Y279	399 aa		13.41	□□□□□ -0.26
MBD1-221	ENST00000589867		E7EUB6	86 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	RCVRN	P35243	200 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	KRTAP10-11	P60412	298 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	RNASE12	Q5GAN4	147 aa	Known RBP	13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	TMEM65	Q6PI78	240 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	OR5T1	Q8NG75	326 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	OR5M8	Q8NGP6	311 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	OR4S2	Q8NH73	311 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	MS4A10	Q96PG2	267 aa		13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	CCDC59	Q9P031	241 aa	Known RBP	13.4	□□□□□ -0.26
MBD1-221	ENST00000589867	TPPP	O94811	219 aa		13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	CNIH1	O95406	144 aa		13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	IL6R	P08887	468 aa	Predicted RBP	13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	SPAG16	Q8N0X2	631 aa		13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	OR11H1	Q8NG94	326 aa		13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	SRSF12	Q8WXF0	261 aa	Known RBP	13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	RHOV	Q96L33	236 aa		13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	DCUN1D5	Q9BTE7	237 aa		13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	RBM38	Q9H0Z9	239 aa	Known RBP	13.39	□□□□□ -0.27
MBD1-221	ENST00000589867	MSGN1	A6NI15	193 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867		M0QYG6	137 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	PGLYRP1	O75594	196 aa	Predicted RBP	13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	APELA	P0DMC3	54 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	HERV-K104	P61576	105 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	DGCR2	P98153	550 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	TNXA	Q16473	311 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	VAX1	Q5SQQ9	334 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	AADACL3	Q5VUY0	350 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	POC5	Q8NA72	575 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	TMEM167A	Q8TBQ9	72 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	MTFP1	Q9UDX5	166 aa		13.38	□□□□□ -0.27
MBD1-221	ENST00000589867	CGB1	A6NKQ9	187 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	TEX22	C9J3V5	150 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	KBTBD11	O94819	623 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	OR2A4	O95047	310 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	BRI3	O95415	125 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	MYOD1	P15172	320 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	KIR2DS2	P43631	304 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	DEFA5	Q01523	94 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	EGFEM1P	Q0D2K5	195 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	POU2AF1	Q16633	256 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	ZNF585B	Q52M93	769 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	PYHIN1	Q6K0P9	492 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	ADAD2	Q8NCV1	583 aa	Known RBP	13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	OR1N2	Q8NGR9	330 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	OR6F1	Q8NGZ6	308 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	OR51H1	Q8NH63	302 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	OR2A7	Q96R45	310 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	SOST	Q9BQB4	213 aa		13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	NXF2	Q9GZY0	626 aa	Known RBP	13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.37	□□□□□ -0.27
MBD1-221	ENST00000589867	DNAH9	Q9NYC9	4486 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	TRAV3	A0A0B4J244	114 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	S1PR2	O95136	353 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms