RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 A0A087WW49 117 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 H3BUA1 57 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 CNIH1O95406 144 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 HLA-DQB1P01920 261 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 TRGV3P03979 118 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 CTXN2P0C2S0 81 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 PRSS3P35030 304 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 CBX5P45973 191 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 LINC00205P59089 165 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 RNASE12Q5GAN4 147 aaKnown RBP11.08□□□□□ -0.64
MBD1-220ENST00000589758 ACSM6Q6P461 480 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 OR6Q1Q8NGQ2 317 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 GRPEL2Q8TAA5 225 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 DYNC2LI1Q8TCX1 351 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 SDHAF2Q9NX18 166 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 EXTL2Q9UBQ6 330 aa11.08□□□□□ -0.64
MBD1-220ENST00000589758 CTDSP2O14595 271 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 IGHV3-11P01762 117 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 RRASP10301 218 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 RTL8BQ17RB0 113 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 LAX1Q8IWV1 398 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 POC5Q8NA72 575 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 SNAPC3Q92966 411 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 OR4C12Q96R67 309 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 ZNF355PQ9NSJ1 428 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 CCDC59Q9P031 241 aaKnown RBP11.07□□□□□ -0.64
MBD1-220ENST00000589758 RYR3Q15413 4870 aa11.07□□□□□ -0.64
MBD1-220ENST00000589758 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 C13orf42A0A1B0GVH6 325 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 SHOXO15266 292 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 CRYGBP07316 175 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 SPNP16150 400 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 ADTRPQ96IZ2 230 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 ASCL2Q99929 193 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 ELOVL1Q9BW60 279 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 C6orf62Q9GZU0 229 aaPredicted RBP11.06□□□□□ -0.64
MBD1-220ENST00000589758 MIXL1Q9H2W2 232 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
MBD1-220ENST00000589758 OR2W1Q9Y3N9 320 aa11.06□□□□□ -0.64
MBD1-220ENST00000589758 NBEAL2Q6ZNJ1 2754 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 BRI3O95415 125 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 PMP2P02689 132 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 GP9P14770 177 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 ZP3P21754 424 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 FCGR2CP31995 323 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 BVESQ8NE79 360 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 OR5T1Q8NG75 326 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 GPX8Q8TED1 209 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 DCUN1D5Q9BTE7 237 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
MBD1-220ENST00000589758 ADAM30Q9UKF2 790 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 COL7A1Q02388 2944 aa11.05□□□□□ -0.64
MBD1-220ENST00000589758 IGKV1D-13A0A0B4J2D9 117 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 IGKV1-13P0DP09 117 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 AADACP22760 399 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 HLA-DMAP28067 261 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 FXYD4P59646 89 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 SSBP2P81877 361 aaPredicted RBP11.04□□□□□ -0.64
MBD1-220ENST00000589758 PJVKQ0ZLH3 352 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 CDK10Q15131 360 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 OR5H2Q8NGV7 314 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 RBM38Q9H0Z9 239 aaKnown RBP11.04□□□□□ -0.64
MBD1-220ENST00000589758 EHFQ9NZC4 300 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 SORL1Q92673 2214 aa11.04□□□□□ -0.64
MBD1-220ENST00000589758 TUSC2O75896 110 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 DUTP33316 252 aaKnown RBP11.03□□□□□ -0.64
MBD1-220ENST00000589758 RFX2P48378 723 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 VMA21Q3ZAQ7 101 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 ZNF645Q8N7E2 425 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
MBD1-220ENST00000589758 SECTM1Q8WVN6 248 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 DDB2Q92466 427 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 DIRAS2Q96HU8 199 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 TINAGL1Q9GZM7 467 aaPredicted RBP11.03□□□□□ -0.64
MBD1-220ENST00000589758 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
MBD1-220ENST00000589758 SCPEP1Q9HB40 452 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 ANAPC10Q9UM13 185 aa11.03□□□□□ -0.64
MBD1-220ENST00000589758 SRRM4A7MD48 611 aaKnown RBP11.02□□□□□ -0.65
MBD1-220ENST00000589758 PPYP01298 95 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 NAT1P18440 290 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 TAS2R46P59540 309 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 UBE2KP61086 200 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 LYSMD2Q8IV50 215 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 OR52I2Q8NH67 350 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 USMG5Q96IX5 58 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 ABHD1Q96SE0 405 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 PHB2Q99623 299 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 CCL28Q9NRJ3 127 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 COA4Q9NYJ1 87 aa11.02□□□□□ -0.65
MBD1-220ENST00000589758 LINC00473A8K010 186 aa11.01□□□□□ -0.65
MBD1-220ENST00000589758 C3orf84H3BNL1 204 aa11.01□□□□□ -0.65
MBD1-220ENST00000589758 SULT1C2O00338 296 aa11.01□□□□□ -0.65
MBD1-220ENST00000589758 CREBL2O60519 120 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms