RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NBR2O15453 112 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 CHST1O43916 411 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 SPDEFO95238 335 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 NQO2P16083 231 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 RAG2P55895 527 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 UBA52P62987 128 aaKnown RBP12.11□□□□□ -0.47
ATG4D-211ENST00000589753 DHRS2Q13268 280 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 PSG5Q15238 335 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 LYG2Q86SG7 212 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 CASTOR1Q8WTX7 329 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 R3HDM4Q96D70 268 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 AIFM2Q9BRQ8 373 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 MXRA5Q9NR99 2828 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 RRHO14718 337 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 SLC25A17O43808 307 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 GPR137BO60478 399 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 NDUFA3O95167 84 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 CDS2O95674 445 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 DHFRP00374 187 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 IGKV1-39P01597 117 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 IGKV1D-39P04432 117 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
ATG4D-211ENST00000589753 SRPXP78539 464 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 OXA1LQ15070 435 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 VMA21Q3ZAQ7 101 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 ZNF695Q8IW36 515 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 VKORC1L1Q8N0U8 176 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 RHOVQ96L33 236 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 PRR13Q9NZ81 148 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
ATG4D-211ENST00000589753 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 M0QZK8 103 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 FGF16O43320 207 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 PRAF2O60831 178 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 ATG12O94817 140 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 KRASP01116 189 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 IL5P05113 134 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
ATG4D-211ENST00000589753 G6PCP35575 357 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 UBE2KP61086 200 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 ERVK-16P61578 105 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 PLGLAQ15195 96 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 POU2AF1Q16633 256 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 TMEM268Q5VZI3 342 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 SSX9Q7RTT3 188 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
ATG4D-211ENST00000589753 LGI3Q8N145 548 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 FAM71E2Q8N5Q1 922 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 C5orf56Q8N8D9 126 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 Q8N9W7 124 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 TEX45Q8NA69 505 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 MINDY2Q8NBR6 621 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 OR52B4Q8NGK2 314 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 LHFPL5Q8TAF8 219 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 RBPMSQ93062 196 aaKnown RBP12.09□□□□□ -0.47
ATG4D-211ENST00000589753 IL22RA2Q969J5 263 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 RASL11BQ9BPW5 248 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 FBXL15Q9H469 300 aa12.09□□□□□ -0.47
ATG4D-211ENST00000589753 METTL1Q9UBP6 276 aaKnown RBP12.09□□□□□ -0.47
ATG4D-211ENST00000589753 PIGBOS1A0A0B4J2F0 54 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 DUS4LO95620 317 aaKnown RBP12.08□□□□□ -0.48
ATG4D-211ENST00000589753 CRYGBP07316 175 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 AKR1C2P52895 323 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 C5orf64Q2M2E5 130 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 ANKRD55Q3KP44 614 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 COQ8AQ8NI60 647 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 ZNF431Q8TF32 576 aaPredicted RBP12.08□□□□□ -0.48
ATG4D-211ENST00000589753 CHPT1Q8WUD6 406 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
ATG4D-211ENST00000589753 GPN1Q9HCN4 374 aaPredicted RBP12.08□□□□□ -0.48
ATG4D-211ENST00000589753 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
ATG4D-211ENST00000589753 FAM181BA6NEQ2 426 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 OR2A4O95047 310 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 AMY1AP04745 511 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 RPL15P61313 204 aaKnown RBP12.07□□□□□ -0.48
ATG4D-211ENST00000589753 OR4A47Q6IF82 309 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 PPP1R27Q86WC6 154 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 PUSL1Q8N0Z8 303 aaKnown RBP12.07□□□□□ -0.48
ATG4D-211ENST00000589753 SLC35G3Q8N808 338 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
ATG4D-211ENST00000589753 MITD1Q8WV92 249 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 OR2A7Q96R45 310 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 PHB2Q99623 299 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 NPFFR1Q9GZQ6 430 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 TMEM140Q9NV12 185 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 BET1LQ9NYM9 111 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 SIGLEC9Q9Y336 463 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 MTORP42345 2549 aa12.07□□□□□ -0.48
ATG4D-211ENST00000589753 A0A0B4J2A0 478 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 KBTBD11O94819 623 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms