RNA–Protein interactions for RNA: ENST00000589222.5

BCAS3-222, Transcript of BCAS3, microtubule associated cell migration factor, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-222	ENST00000589222	LYNX1	G3V0Z9	82 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	OR9G9	P0C7N8	305 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	LYNX1	P0DP58	116 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	BSX	Q3C1V8	233 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	SPNS3	Q6ZMD2	512 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	C16orf82	Q7Z2V1	217 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	MRPL41	Q8IXM3	137 aa	Known RBP	10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	OR10X1	Q8NGY0	326 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	TMEM147	Q9BVK8	224 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	KIAA1549	Q9HCM3	1950 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	FAM90A27P	A6NNH2	459 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	C17orf112	F2Z3M2	114 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	REG1A	P05451	166 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	STUM	Q69YW2	141 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	PAX6	P26367	422 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	PLGLA	Q15195	96 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	PRR27	Q6MZM9	219 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	STARD4	Q96DR4	205 aa		10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	GAR1	Q9NY12	217 aa	Known RBP	10.2	□□□□□ -0.78
BCAS3-222	ENST00000589222	NOTCH2	Q04721	2471 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	TLN2	Q9Y4G6	2542 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222		H3BTX0	84 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	RRH	O14718	337 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	GALR2	O43603	387 aa	Predicted RBP	10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	CCL3L1	P16619	93 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	GALR1	P47211	349 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	MLANA	Q16655	118 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	TMEM41B	Q5BJD5	291 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	HAPLN4	Q86UW8	402 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	WDR31	Q8NA23	367 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	OR4P4	Q8NGL7	312 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	SPRY4	Q9C004	299 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	VAX2	Q9UIW0	290 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	FUT9	Q9Y231	359 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF292	O60281	2723 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	NAV3	Q8IVL0	2385 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	CD1B	P29016	333 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	ATP5G3	P48201	142 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	NRN1L	Q496H8	165 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	RNF115	Q9Y4L5	304 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	CLN5	O75503	358 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	IGKV1D-33	P01593	117 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	IGKV1-33	P01594	117 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	OR5G3	P0C626	314 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	COX7A1	P24310	79 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	MEF2B	Q02080	365 aa	Predicted RBP	10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	MOB3B	Q86TA1	216 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	NHLRC2	Q8NBF2	726 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	MALSU1	Q96EH3	234 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	DERL1	Q9BUN8	251 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZDHHC11	Q9H8X9	412 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	CALY	Q9NYX4	217 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	PTPN13	Q12923	2485 aa		10.19	□□□□□ -0.78
BCAS3-222	ENST00000589222	BTBD17	A6NE02	478 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF891	A8MT65	544 aa	Predicted RBP	10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	IQCF6	A8MYZ5	107 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	MKRN2OS	H3BPM6	223 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF705D	P0CH99	300 aa	Predicted RBP	10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF705B	P0CI00	300 aa	Predicted RBP	10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	TMEM140	Q9NV12	185 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	USP9Y	O00507	2555 aa	Predicted RBP	10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	ARHGAP32	A7KAX9	2087 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	TRGC1	P0CF51	173 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	RAB31	Q13636	194 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	KHDC3L	Q587J8	217 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	MRPL37	Q9BZE1	423 aa	Known RBP	10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	GZMH	P20718	246 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	SLC35E3	Q7Z769	313 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	PARL	Q9H300	379 aa		10.18	□□□□□ -0.78
BCAS3-222	ENST00000589222	EXPH5	Q8NEV8	1989 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	LOC102723971	A0A1B0GUV8	181 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF726P1	Q15940	193 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	LRRC75B	Q2VPJ9	315 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	MRGPRG	Q86SM5	289 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	ABHD17A	Q96GS6	310 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	SCGB1D1	O95968	90 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	LINC00596	Q86U02	117 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	COMMD5	Q9GZQ3	224 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	SLC35D1	Q9NTN3	355 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	IGKV1D-17	A0A075B6S4	117 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	MDFIC2	A0A1B0GVS7	189 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	SS18L1	O75177	396 aa	Predicted RBP	10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	FAM87A	P0C7U9	286 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	RPL31	P62899	125 aa	Known RBP	10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	SSX2	Q16385	188 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	BATF	Q16520	125 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	MSMP	Q1L6U9	139 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	PLA2G2C	Q5R387	149 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	GCSAM	Q8N6F7	178 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	ZNF383	Q8NA42	475 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	IGFBPL1	Q8WX77	278 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	CIB3	Q96Q77	187 aa	Predicted RBP	10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	CLCF1	Q9UBD9	225 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	RNF7	Q9UBF6	113 aa		10.17	□□□□□ -0.78
BCAS3-222	ENST00000589222	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.16	□□□□□ -0.78
BCAS3-222	ENST00000589222	TMEM210	A6NLX4	147 aa		10.16	□□□□□ -0.78

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