RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 HDGFL3Q9Y3E1 203 aa0.39□□□□□ -2.35
PDCD5-206ENST00000588622 SCAF11Q99590 1463 aaKnown RBP0.38□□□□□ -2.35
PDCD5-206ENST00000588622 H3BT86 120 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 ADAP1O75689 374 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 LINC00614P0C842 121 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 F8A1P23610 371 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 MIPP30301 263 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 KDELR2P33947 212 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 ETV1P50549 477 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 RAB14P61106 215 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 ACSM3Q53FZ2 586 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 ATP6V1C2Q8NEY4 427 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 OR10D3Q8NH80 312 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 OR5AK3PQ8NH89 298 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 C12orf43Q96C57 262 aaKnown RBP0.38□□□□□ -2.35
PDCD5-206ENST00000588622 SIPA1L1O43166 1804 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 ALPK2Q86TB3 2170 aa0.38□□□□□ -2.35
PDCD5-206ENST00000588622 MED12LQ86YW9 2145 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 FLT4P35916 1363 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 TMED7-TICAM2A0A0A6YYA0 188 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 TRAV38-1A0A0B4J264 116 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 OR51F1A6NGY5 319 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 AZIN1O14977 448 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 CREBL2O60519 120 aaPredicted RBP0.37□□□□□ -2.35
PDCD5-206ENST00000588622 HLA-DQB2P05538 268 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 CXCL2P19875 107 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 AP1S1P61966 158 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 HIST1H4AP62805 103 aaKnown RBP0.37□□□□□ -2.35
PDCD5-206ENST00000588622 DCXRQ7Z4W1 244 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 KRTAP19-3Q7Z4W3 81 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 C17orf78Q8N4C9 275 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 LRRC45Q96CN5 670 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 CHST6Q9GZX3 395 aa0.37□□□□□ -2.35
PDCD5-206ENST00000588622 PTPRSQ13332 1948 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 SMARCA4P51532 1647 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 MEIS3P1A6NDR6 274 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 IBA57-AS1B1ANH7 110 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 MKRN2OSH3BPM6 223 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 SCN2BO60939 215 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 NPPAP01160 153 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 PPBPP02775 128 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 TFPTP0C1Z6 253 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 CCL5P13501 91 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 CXCL3P19876 107 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 ALDH3A1P30838 453 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 SLAMF1Q13291 335 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 ZNHIT3Q15649 155 aaPredicted RBP0.36□□□□□ -2.35
PDCD5-206ENST00000588622 PLPPR5Q32ZL2 321 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 TMEM86AQ8N2M4 240 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 FAM19A2Q8N3H0 131 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 RIBC1Q8N443 379 aaPredicted RBP0.36□□□□□ -2.35
PDCD5-206ENST00000588622 RPP25LQ8N5L8 163 aaKnown RBP0.36□□□□□ -2.35
PDCD5-206ENST00000588622 RBP7Q96R05 134 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 TMEM109Q9BVC6 243 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 NSRP1Q9H0G5 558 aaKnown RBP0.36□□□□□ -2.35
PDCD5-206ENST00000588622 C1orf109Q9NX04 203 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 NAT8Q9UHE5 227 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 NUP160Q12769 1436 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 RP1P56715 2156 aa0.36□□□□□ -2.35
PDCD5-206ENST00000588622 TRAPPC2LH3BP13 241 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 TRGC1P0CF51 173 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 AKR1C1Q04828 323 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 HLA-DRB5Q30154 266 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 SAPCD1Q5SSQ6 148 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 RASSF6Q6ZTQ3 369 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 DYNAPQ8N1N2 210 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 UMODL1-AS1Q8N2C9 162 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 OR5L1Q8NGL2 311 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 RAB2BQ8WUD1 216 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 MED10Q9BTT4 135 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 REG4Q9BYZ8 158 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 ZNHIT6Q9NWK9 470 aaKnown RBP0.35□□□□□ -2.35
PDCD5-206ENST00000588622 TP53TG1Q9Y2A0 90 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 GMEB1Q9Y692 573 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 RIMS2Q9UQ26 1411 aa0.35□□□□□ -2.35
PDCD5-206ENST00000588622 A0A1W2PP64 1363 aa0.34□□□□□ -2.35
PDCD5-206ENST00000588622 ZNF879B4DU55 563 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 CCRL2O00421 344 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 GEMIN2O14893 280 aaKnown RBP0.34□□□□□ -2.36
PDCD5-206ENST00000588622 RD3LP0DJH9 198 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 RPS24P62847 133 aaKnown RBP0.34□□□□□ -2.36
PDCD5-206ENST00000588622 HLA-DRB3P79483 266 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 JOSD1Q15040 202 aaPredicted RBP0.34□□□□□ -2.36
PDCD5-206ENST00000588622 EBPQ15125 230 aaKnown RBP0.34□□□□□ -2.36
PDCD5-206ENST00000588622 DNAL1Q4LDG9 190 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 C10orf55Q5SWW7 151 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 C9orf64Q5T6V5 341 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 FAM27BQ5VT28 67 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 AADACL4Q5VUY2 407 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.34□□□□□ -2.36
PDCD5-206ENST00000588622 SPATA24Q86W54 205 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 SLC37A2Q8TED4 501 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 SETD5Q9C0A6 1442 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 LHFPL6Q9Y693 200 aa0.34□□□□□ -2.36
PDCD5-206ENST00000588622 LRPPRCP42704 1394 aaKnown RBP0.33□□□□□ -2.36
PDCD5-206ENST00000588622 TONSLQ96HA7 1378 aa0.33□□□□□ -2.36
PDCD5-206ENST00000588622 GREB1Q4ZG55 1949 aa0.33□□□□□ -2.36
PDCD5-206ENST00000588622 LAMB4A4D0S4 1761 aa0.33□□□□□ -2.36
PDCD5-206ENST00000588622 TEX50A0A1B0GTY4 177 aa0.33□□□□□ -2.36
PDCD5-206ENST00000588622 TMEM269A0A1B0GVZ9 245 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms