RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ALKBH6Q3KRA9 238 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 MED12LQ86YW9 2145 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 ZADH2Q8N4Q0 377 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 ZNF808Q8N4W9 903 aaPredicted RBP11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 OR4A16Q8NH70 328 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 MRGPRDQ8TDS7 321 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 LRRC29Q8WV35 223 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 RAB1CQ92928 201 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 R3HDM4Q96D70 268 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 ADTRPQ96IZ2 230 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 SSX3Q99909 188 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 CENPEQ02224 2701 aa11.72□□□□□ -0.53
NEDD4L-223ENST00000588516 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 OR5H1A6NKK0 313 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 F6UZH7 168 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 PDE6DO43924 150 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 NDUFA6P56556 154 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 DEFB109BQ30KR1 87 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 PDLIM3Q53GG5 364 aaPredicted RBP11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 MYPOPQ86VE0 399 aaPredicted RBP11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 GCNT2Q8N0V5 402 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 CHODLQ9H9P2 273 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 GNG12Q9UBI6 72 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 TP53TG5Q9Y2B4 290 aa11.71□□□□□ -0.53
NEDD4L-223ENST00000588516 A0A1W2PPE3 182 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 MARCH11A6NNE9 402 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 C17orf98A8MV24 154 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 SRRM5B3KS81 715 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 CLN5O75503 358 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 FBP1P09467 338 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 FABP6P51161 128 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 RPL30P62888 115 aaKnown RBP11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 RAB31Q13636 194 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 BSXQ3C1V8 233 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 Q3ZCU0 254 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 WDR25Q64LD2 544 aaPredicted RBP11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 KCNIP4Q6PIL6 250 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 RPP25LQ8N5L8 163 aaKnown RBP11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 C9orf106Q8NAJ2 232 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 FDCSPQ8NFU4 85 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 OR10A7Q8NGE5 316 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 CORO2AQ92828 525 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 S100PBPQ96BU1 408 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 NPCDR1Q9BY65 106 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 SRD5A3Q9H8P0 318 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 DOK5Q9P104 306 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 PSG11Q9UQ72 335 aa11.7□□□□□ -0.54
NEDD4L-223ENST00000588516 MBD3L4A6NDZ8 208 aaPredicted RBP11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 MBD3L3A6NE82 208 aaPredicted RBP11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 MBD3L5A6NJ08 208 aaPredicted RBP11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 PMS2P5A8MQ11 134 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 C15orf65H3BRN8 121 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 H7BYZ3 331 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 F2RL2O00254 374 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 WNT9BO14905 357 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 RAMP3O60896 148 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 MT-CO2P00403 227 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 IGHV3-13P01766 116 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 CD99P14209 185 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 SRP14P37108 136 aaKnown RBP11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 FGF8P55075 233 aaPredicted RBP11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 PMP22Q01453 160 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 TIMM23BQ5SRD1 257 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 ATP1A1-AS1Q5TC04 95 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 PRAMEF5Q5TYX0 476 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 PRAMEF6Q5VXH4 476 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 FAM180AQ6UWF9 173 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 OR4S2Q8NH73 311 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 MBD3L2Q8NHZ7 208 aaPredicted RBP11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 S1PR3Q99500 378 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 CLN8Q9UBY8 286 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 WDR83OSQ9Y284 106 aa11.69□□□□□ -0.54
NEDD4L-223ENST00000588516 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 IGHV1-18A0A0C4DH31 117 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 A0A1W2PPV4 95 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 ZG16O60844 167 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 CRYAAP02489 173 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 CXCL1P09341 107 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 CD1BP29016 333 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 DUTP33316 252 aaKnown RBP11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 OPRK1P41145 380 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 CEBPDP49716 269 aaPredicted RBP11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 ERVFRD-1P60508 538 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 ADIRFQ15847 76 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 SSX2Q16385 188 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 MORN2Q502X0 79 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 ZNF826PQ6ZT77 177 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 SSX8Q7RTT4 187 aa11.68□□□□□ -0.54
NEDD4L-223ENST00000588516 SLC16A13Q7RTY0 426 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms