RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 DCTN3O75935 186 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 YIF1AO95070 293 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TYMSP04818 313 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 S100A8P05109 93 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 CRHP06850 196 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 NBEAP1P0C6P0 100 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TLX1NBP0CAT3 122 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 IGHV1-8P0DP01 117 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TAC1P20366 129 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PSMB9P28065 219 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 CA5AP35218 305 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 EIF1P41567 113 aaKnown RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 RPS10P46783 165 aaKnown RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM33P57088 247 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TAS2R41P59536 307 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 ELF3P78545 371 aaPredicted RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 RELAQ04206 551 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 BAXQ07812 192 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 MLLT11Q13015 90 aaPredicted RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 BIKQ13323 160 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 C16orf72Q14CZ0 275 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PMVKQ15126 192 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 LINC00303Q3SY05 128 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 HIST2H3PS2Q5TEC6 136 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 LPCAT3Q6P1A2 487 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 MED27Q6P2C8 311 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 Q6P435 159 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 CLEC19AQ6UXS0 136 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM144Q7Z5S9 345 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 ZBTB8OSQ8IWT0 167 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 CTAGE3PQ8IX95 158 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 EIF4E3Q8N5X7 224 aaKnown RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR9A2Q8NGT5 310 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR13D1Q8NGV5 346 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR10K1Q8NGX5 313 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR10X1Q8NGY0 326 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR6K3Q8NGY3 331 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 ZNF721Q8TF20 911 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 SKA2Q8WVK7 121 aaPredicted RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 RAB8BQ92930 207 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TLCD1Q96CP7 247 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 L3HYPDHQ96EM0 354 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM56Q96MV1 263 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 C18orf15Q96N68 181 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PRAP1Q96NZ9 151 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR2V2Q96R30 315 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PITX2Q99697 317 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 RTBDNQ9BSG5 229 aaPredicted RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM208Q9BTX3 173 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TAPBPLQ9BX59 468 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PECRQ9BY49 303 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FGF23Q9GZV9 251 aaPredicted RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR52D1Q9H346 318 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 BOLA2Q9H3K6 86 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FAIMQ9NVQ4 179 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 RBM22Q9NW64 420 aaKnown RBP eCLIP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FAM206AQ9NX38 181 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 GLTPQ9NZD2 209 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 GNG8Q9UK08 70 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 ANGPT4Q9Y264 503 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PRELID3BQ9Y3B1 194 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 OR51B4Q9Y5P0 310 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 SNX10Q9Y5X0 201 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 ENPP4Q9Y6X5 453 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 MYH8P13535 1937 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 ADGRG4Q8IZF6 3080 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 SCN2AQ99250 2005 aa1.96□□□□□ -2.09
VPS4B-203ENST00000588323 BOD1L1Q8NFC6 3051 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 BAZ2AQ9UIF9 1905 aaKnown RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 MYH4Q9Y623 1939 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 ARL5CA6NH57 179 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 EVPLLA8MZ36 301 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR11H12B2RN74 326 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 TRIM49D1C9J1S8 452 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 G3V2T6 193 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 PANO1I0J062 215 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 M0QYV0 167 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SLC17A3O00476 420 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SLC22A1O15245 554 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 FGF16O43320 207 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CHST10O43529 356 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SYNGR1O43759 233 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 ANGPTL7O43827 346 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 TPST1O60507 370 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 UGT2B11O75310 529 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SPAG7O75391 227 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 GCM2O75603 506 aaPredicted RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR2B3O76000 313 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 PDYNP01213 254 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 IFNA10P01566 189 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 HLA-AP01891 365 aaKnown RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 IFNA4P05014 189 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SMIM6P0DI80 62 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 IFI30P13284 250 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 HIST1H1CP16403 213 aaKnown RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 AKR1C4P17516 323 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 TSPOP30536 169 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CCR7P32248 378 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 PRSS3P35030 304 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 AKR1C3P42330 323 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms