RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 SOX15O60248 233 aa21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 NOL3O60936 208 aaKnown RBP21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 RPL5P46777 297 aaKnown RBP21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 RAB25P57735 213 aa21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 EIF4EBP1Q13541 118 aaPredicted RBP21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 KIAA0141Q14154 515 aaPredicted RBP21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 PRSS8Q16651 343 aa21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 OR2B11Q5JQS5 317 aa21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 SNX29P2Q8IUI4 249 aa21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 ADAM30Q9UKF2 790 aa21.16■□□□□ 0.98
SMARCD2-210ENST00000584400 H3BUA1 57 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 TPPPO94811 219 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 PMP2P02689 132 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 RFX2P48378 723 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 TMBIM6P55061 237 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 PJVKQ0ZLH3 352 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 DEFB136Q30KP8 78 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 TMEM17Q86X19 198 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 MMD2Q8IY49 270 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 OR11H1Q8NG94 326 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 OR6F1Q8NGZ6 308 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 DUX3Q96PT4 197 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 PHB2Q99623 299 aa21.15■□□□□ 0.98
SMARCD2-210ENST00000584400 HRASP01112 189 aa21.14■□□□□ 0.97
SMARCD2-210ENST00000584400 RCVRNP35243 200 aa21.14■□□□□ 0.97
SMARCD2-210ENST00000584400 TNXAQ16473 311 aa21.14■□□□□ 0.97
SMARCD2-210ENST00000584400 FOXB2Q5VYV0 432 aa21.14■□□□□ 0.97
SMARCD2-210ENST00000584400 ZNF2Q9BSG1 426 aaPredicted RBP21.14■□□□□ 0.97
SMARCD2-210ENST00000584400 GNB4Q9HAV0 340 aa21.14■□□□□ 0.97
SMARCD2-210ENST00000584400 PLXNB1O43157 2135 aa21.14■□□□□ 0.97
SMARCD2-210ENST00000584400 TNFSF12O43508 249 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 OR8U8P0C7N1 319 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 SAA1P0DJI8 122 aaPredicted RBP21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 TPPP2P59282 170 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 IDO2Q6ZQW0 420 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 POC5Q8NA72 575 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 OR1N2Q8NGR9 330 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 MOB3AQ96BX8 217 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 ZNF355PQ9NSJ1 428 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 EXTL2Q9UBQ6 330 aa21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 ZMAT5Q9UDW3 170 aaKnown RBP21.13■□□□□ 0.97
SMARCD2-210ENST00000584400 I3L521 148 aa21.12■□□□□ 0.97
SMARCD2-210ENST00000584400 RBFOX2O43251 390 aaKnown RBP eCLIP21.12■□□□□ 0.977e-10■■■□□ 18.3
SMARCD2-210ENST00000584400 HLA-DMAP28067 261 aa21.12■□□□□ 0.97
SMARCD2-210ENST00000584400 HRH1P35367 487 aa21.12■□□□□ 0.97
SMARCD2-210ENST00000584400 TSPAN5P62079 268 aa21.12■□□□□ 0.97
SMARCD2-210ENST00000584400 SSBP2P81877 361 aaPredicted RBP21.12■□□□□ 0.97
SMARCD2-210ENST00000584400 FHL3Q13643 280 aa21.12■□□□□ 0.97
SMARCD2-210ENST00000584400 CD300LFQ8TDQ1 290 aa21.12■□□□□ 0.97
SMARCD2-210ENST00000584400 RGS5O15539 181 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 OR2A4O95047 310 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 TRGV3P03979 118 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 ZNF616Q08AN1 781 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 SPCS2Q15005 226 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 ZNF818PQ6ZRF7 136 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 LYSMD2Q8IV50 215 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 CMTM1Q8IZ96 169 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 SPAG16Q8N0X2 631 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 SRSF12Q8WXF0 261 aaKnown RBP21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 MS4A10Q96PG2 267 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 OR5B12Q96R08 314 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 OR2A7Q96R45 310 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 SPIN2AQ99865 258 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 SPIN2BQ9BPZ2 258 aa21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 ZNF430Q9H8G1 570 aaPredicted RBP21.11■□□□□ 0.97
SMARCD2-210ENST00000584400 MSGN1A6NI15 193 aa21.1■□□□□ 0.97
SMARCD2-210ENST00000584400 MPPED1O15442 326 aa21.1■□□□□ 0.97
SMARCD2-210ENST00000584400 BRI3O95415 125 aa21.1■□□□□ 0.97
SMARCD2-210ENST00000584400 LPCAT3Q6P1A2 487 aa21.1■□□□□ 0.97
SMARCD2-210ENST00000584400 OR5T1Q8NG75 326 aa21.1■□□□□ 0.97
SMARCD2-210ENST00000584400 CASTOR1Q8WTX7 329 aa21.1■□□□□ 0.97
SMARCD2-210ENST00000584400 CMYA5Q8N3K9 4069 aa21.1■□□□□ 0.97
SMARCD2-210ENST00000584400 A0A0G2JLM5 398 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 HPRT1P00492 218 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 LGALS1P09382 135 aaKnown RBP21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 S100GP29377 79 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 GNRHRP30968 328 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 MRGPRG-AS1Q2M3A8 158 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 AADACL3Q5VUY0 350 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 RHOVQ96L33 236 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 GPHA2Q96T91 129 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 SCOCQ9UIL1 159 aa21.09■□□□□ 0.97
SMARCD2-210ENST00000584400 MAS1LP35410 378 aa21.08■□□□□ 0.97
SMARCD2-210ENST00000584400 BRWD1-AS2P59051 145 aa21.08■□□□□ 0.97
SMARCD2-210ENST00000584400 CCDC59Q9P031 241 aaKnown RBP21.08■□□□□ 0.97
SMARCD2-210ENST00000584400 C13orf42A0A1B0GVH6 325 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 KBTBD11O94819 623 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 TAS2R31P59538 309 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 VKORC1L1Q8N0U8 176 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 PUSL1Q8N0Z8 303 aaKnown RBP21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 OR51H1Q8NH63 302 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 OR4A5Q8NH83 315 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 TMEM167AQ8TBQ9 72 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 COA4Q9NYJ1 87 aa21.07■□□□□ 0.96
SMARCD2-210ENST00000584400 LINC01619G3V211 115 aa21.06■□□□□ 0.96
SMARCD2-210ENST00000584400 VAX1Q5SQQ9 334 aa21.06■□□□□ 0.96
SMARCD2-210ENST00000584400 C9orf66Q5T8R8 295 aa21.06■□□□□ 0.96
SMARCD2-210ENST00000584400 FCAMRQ8WWV6 532 aa21.06■□□□□ 0.96
SMARCD2-210ENST00000584400 AURKAIP1Q9NWT8 199 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-210ENST00000584400 RABL2AQ9UBK7 228 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms