RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 LFNGQ8NES3 379 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 OR5L1Q8NGL2 311 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 IMMP2LQ96T52 175 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 RBM7Q9Y580 266 aaKnown RBP0.71□□□□□ -2.3
SKA2-210ENST00000584089 NUP160Q12769 1436 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 A0A1W2PP64 1363 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 GREB1Q4ZG55 1949 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 TRAV7A0A075B6U4 112 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 IGKV2D-26A0A0A0MRZ7 120 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 F8VZ95 297 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 CCRL2O00421 344 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 AZIN1O14977 448 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 TOX3O15405 576 aaPredicted RBP0.7□□□□□ -2.3
SKA2-210ENST00000584089 STX10O60499 249 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 NEMFO60524 1076 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 AQP4P55087 323 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 HIST1H4AP62805 103 aaKnown RBP0.7□□□□□ -2.3
SKA2-210ENST00000584089 ELOBQ15370 118 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 PLPPR5Q32ZL2 321 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 DNAL1Q4LDG9 190 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 GPHB5Q86YW7 130 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 TP53TG1Q9Y2A0 90 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 CACNA1BQ00975 2339 aa0.7□□□□□ -2.3
SKA2-210ENST00000584089 SMARCA4P51532 1647 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 A0A0D9SEW6 157 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 TEX50A0A1B0GTY4 177 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 A0A1B0GW54 56 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 CREBL2O60519 120 aaPredicted RBP0.69□□□□□ -2.3
SKA2-210ENST00000584089 ADAP1O75689 374 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 ORM1P02763 201 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 HLA-DQB2P05538 268 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 LGALS1P09382 135 aaKnown RBP0.69□□□□□ -2.3
SKA2-210ENST00000584089 CXCL2P19875 107 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 HADHBP55084 474 aaKnown RBP0.69□□□□□ -2.3
SKA2-210ENST00000584089 RPS24P62847 133 aaKnown RBP0.69□□□□□ -2.3
SKA2-210ENST00000584089 AKR1C1Q04828 323 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 LRRC75BQ2VPJ9 315 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 ARHGAP11BQ3KRB8 267 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 Q8N2B8 174 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 TMEM109Q9BVC6 243 aa0.69□□□□□ -2.3
SKA2-210ENST00000584089 NSRP1Q9H0G5 558 aaKnown RBP0.69□□□□□ -2.3
SKA2-210ENST00000584089 ZNHIT6Q9NWK9 470 aaKnown RBP0.69□□□□□ -2.3
SKA2-210ENST00000584089 SCAF11Q99590 1463 aaKnown RBP0.68□□□□□ -2.3
SKA2-210ENST00000584089 TRAV38-1A0A0B4J264 116 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 C5orf49A4QMS7 147 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 ATP6V1G2O95670 118 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 RD3LP0DJH9 198 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 CXCL3P19876 107 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 RPL28P46779 137 aaKnown RBP0.68□□□□□ -2.3
SKA2-210ENST00000584089 HLA-DRB3P79483 266 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 EMX1Q04741 257 aaPredicted RBP0.68□□□□□ -2.3
SKA2-210ENST00000584089 SURF2Q15527 256 aaPredicted RBP0.68□□□□□ -2.3
SKA2-210ENST00000584089 DEFB115Q30KQ5 88 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 ACSM3Q53FZ2 586 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 DCXRQ7Z4W1 244 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 BOD1L2Q8IYS8 172 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 TMEM86AQ8N2M4 240 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 SLC37A2Q8TED4 501 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 ODF3Q96PU9 254 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 TIPINQ9BVW5 301 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 TREM1Q9NP99 234 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 FLT4P35916 1363 aa0.68□□□□□ -2.3
SKA2-210ENST00000584089 TMEM213A2RRL7 107 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 FTCDNL1E5RQL4 147 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 SMLR1H3BR10 107 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 H3BT86 120 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 ORC5O43913 435 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 PRB4P10163 310 aaPredicted RBP0.67□□□□□ -2.3
SKA2-210ENST00000584089 DEFA4P12838 97 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 RAB14P61106 215 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 FAM173BQ6P4H8 233 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 SPATA24Q86W54 205 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 DYNAPQ8N1N2 210 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 RIBC1Q8N443 379 aaPredicted RBP0.67□□□□□ -2.3
SKA2-210ENST00000584089 C15orf53Q8NAA6 179 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 RAB2BQ8WUD1 216 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 CHST6Q9GZX3 395 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 SLC22A4Q9H015 551 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 HES4Q9HCC6 221 aa0.67□□□□□ -2.3
SKA2-210ENST00000584089 TMED7-TICAM2A0A0A6YYA0 188 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 OR51F1A6NGY5 319 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 ATP8B1O43520 1251 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 SCN2BO60939 215 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 IL6P05231 212 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 ANGPT1Q15389 498 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 C9orf64Q5T6V5 341 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 RASSF6Q6ZTQ3 369 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 RPP25LQ8N5L8 163 aaKnown RBP0.66□□□□□ -2.3
SKA2-210ENST00000584089 ANKRD36BP1Q96IX9 119 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 CCL13Q99616 98 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 XAGE1AQ9HD64 81 aa0.66□□□□□ -2.3
SKA2-210ENST00000584089 MED12LQ86YW9 2145 aa0.65□□□□□ -2.3
SKA2-210ENST00000584089 MEIS3P1A6NDR6 274 aa0.65□□□□□ -2.31
SKA2-210ENST00000584089 APOMO95445 188 aa0.65□□□□□ -2.31
SKA2-210ENST00000584089 PPBPP02775 128 aa0.65□□□□□ -2.31
SKA2-210ENST00000584089 CD40LGP29965 261 aa0.65□□□□□ -2.31
SKA2-210ENST00000584089 SLCO1A2P46721 670 aa0.65□□□□□ -2.31
SKA2-210ENST00000584089 PMS2P3Q13401 168 aa0.65□□□□□ -2.31
SKA2-210ENST00000584089 JOSD1Q15040 202 aaPredicted RBP0.65□□□□□ -2.31
SKA2-210ENST00000584089 DNM1P34Q6PK57 102 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms