RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ZNF418Q8TF45 676 aaPredicted RBP8.82□□□□□ -1
TOP3A-216ENST00000583804 MED9Q9NWA0 146 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 NSD1Q96L73 2696 aaPredicted RBP8.81□□□□□ -1
TOP3A-216ENST00000583804 BTBD17A6NE02 478 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 H3BUX3 64 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 SHOXO15266 292 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
TOP3A-216ENST00000583804 ADAP1O75689 374 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 CT45A6P0DMU7 189 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 CT45A5P0DMU8 189 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 CT45A7P0DMV0 189 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 DUTP33316 252 aaKnown RBP8.81□□□□□ -1
TOP3A-216ENST00000583804 AP2S1P53680 142 aaPredicted RBP8.81□□□□□ -1
TOP3A-216ENST00000583804 RAB14P61106 215 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 RND3P61587 244 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 FGL1Q08830 312 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 EIF4EBP1Q13541 118 aaPredicted RBP8.81□□□□□ -1
TOP3A-216ENST00000583804 TMEM65Q6PI78 240 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 C11orf88Q6PI97 169 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 ZNF383Q8NA42 475 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 ZBTB34Q8NCN2 500 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 WDR89Q96FK6 387 aaPredicted RBP8.81□□□□□ -1
TOP3A-216ENST00000583804 AKR1E2Q96JD6 320 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 CITED4Q96RK1 184 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 NABP2Q9BQ15 211 aa8.81□□□□□ -1
TOP3A-216ENST00000583804 H7C2Y5 167 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 S1PR2O95136 353 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 NXPH3O95157 252 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 CFDP00746 253 aaPredicted RBP8.8□□□□□ -1
TOP3A-216ENST00000583804 IGHV4-59P01825 116 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 RRASP10301 218 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 F2RP25116 425 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 LPAR6P43657 344 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 CATR1Q13166 79 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 HES1Q14469 280 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 TMEM187Q14656 261 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 LY6EQ16553 131 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 IZUMO4Q1ZYL8 232 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 TMEM268Q5VZI3 342 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 TMUB2Q71RG4 321 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 SPAG16Q8N0X2 631 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 COQ8AQ8NI60 647 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
TOP3A-216ENST00000583804 SSMEM1Q8WWF3 244 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 CFHR4Q92496 578 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 DUX5Q96PT3 197 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 PHB2Q99623 299 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 PRDM13Q9H4Q3 707 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 LIN7CQ9NUP9 197 aaKnown RBP8.8□□□□□ -1
TOP3A-216ENST00000583804 KCNIP3Q9Y2W7 256 aa8.8□□□□□ -1
TOP3A-216ENST00000583804 C13orf42A0A1B0GVH6 325 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 RNF212BA8MTL3 300 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 MPTX1A8MV57 137 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 H0Y980 276 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 DUS4LO95620 317 aaKnown RBP8.79□□□□□ -1
TOP3A-216ENST00000583804 IGKV1D-33P01593 117 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 IGKV1-33P01594 117 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 APOA2P02652 100 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 SERPINE2P07093 398 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 SNRNP70P08621 437 aaKnown RBP8.79□□□□□ -1
TOP3A-216ENST00000583804 FAM106CPP0CH98 169 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 SLC25A4P12235 298 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 CD1BP29016 333 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 IER3P46695 156 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 THBS3P49746 956 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 DYNLT3P51808 116 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 TAGLNQ01995 201 aaKnown RBP8.79□□□□□ -1
TOP3A-216ENST00000583804 HNF4GQ14541 408 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 ZNF345Q14585 488 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 MSMO1Q15800 293 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 AANATQ16613 207 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 ZNF66Q6ZN08 573 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 LIAT1Q6ZQX7 453 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 SSX9Q7RTT3 188 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 ZNF695Q8IW36 515 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 CCDC28AQ8IWP9 274 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 VKORC1L1Q8N0U8 176 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 SCARB1Q8WTV0 552 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 GLYATL2Q8WU03 294 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 MITD1Q8WV92 249 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 ADTRPQ96IZ2 230 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 HSD17B10Q99714 261 aaKnown RBP8.79□□□□□ -1
TOP3A-216ENST00000583804 SLC35D1Q9NTN3 355 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 ZFHX3Q15911 3703 aa8.79□□□□□ -1
TOP3A-216ENST00000583804 TRAV14DV4A0A0A6YYC5 116 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 A0A0B4J2A0 478 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 A0A0D9SG52 128 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 C5orf51A6NDU8 294 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 H0YJW9 148 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 ARPC5O15511 151 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 VENTXO95231 258 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 CRYZL1O95825 349 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 MC5RP33032 325 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 BRWD1-AS2P59051 145 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 KRTAP21-3Q3LHN1 58 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 ZNF585BQ52M93 769 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 FBLN7Q53RD9 439 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 TOR2AQ5JU69 321 aa8.78□□□□□ -1
TOP3A-216ENST00000583804 LYZL2Q7Z4W2 148 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms