RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 DCUN1D5Q9BTE7 237 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 GABARAPL1Q9H0R8 117 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 PLEKHJ1Q9NW61 149 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 ERVK13-1Q9NX77 482 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 RBM7Q9Y580 266 aaKnown RBP8.13□□□□□ -1.11
CASC3-208ENST00000583649 DEFB131BA0A096LNP1 70 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 ERICH4A6NGS2 130 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 E9PI62 339 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 IGFBP3P17936 291 aaPredicted RBP8.12□□□□□ -1.11
CASC3-208ENST00000583649 LINC00205P59089 165 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 PAFAH1B2P68402 229 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 HLA-DRB3P79483 266 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 CDK10Q15131 360 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
CASC3-208ENST00000583649 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 ZNF880Q6PDB4 577 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 IDO2Q6ZQW0 420 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 Q6ZTC4 211 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 VSTM2AQ8TAG5 236 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 LGALS12Q96DT0 336 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 SMPD3Q9NY59 655 aaPredicted RBP8.12□□□□□ -1.11
CASC3-208ENST00000583649 RDH8Q9NYR8 311 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 OR1A1Q9P1Q5 309 aa8.12□□□□□ -1.11
CASC3-208ENST00000583649 IGLV2-18A0A075B6J9 118 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 TCRBV3S1A0A5B6 114 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 PROP1O75360 226 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 CRYZL1O95825 349 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 NAPSAO96009 420 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 FCGR1AP12314 374 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 GTF2A1P52655 376 aaPredicted RBP8.11□□□□□ -1.11
CASC3-208ENST00000583649 ATP6AP1Q15904 470 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 Q499Y3 187 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 YIF1BQ5BJH7 314 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 TTC23Q5W5X9 447 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 UNQ9165/PRO28630Q6UXU0 137 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 C6orf201Q7Z4U5 140 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 FYTTD1Q96QD9 318 aaKnown RBP8.11□□□□□ -1.11
CASC3-208ENST00000583649 OR2D2Q9H210 308 aa8.11□□□□□ -1.11
CASC3-208ENST00000583649 ZNF430Q9H8G1 570 aaPredicted RBP8.11□□□□□ -1.11
CASC3-208ENST00000583649 HSPG2P98160 4391 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 TRBV6-6A0A0A6YYG2 114 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 C15orf61A6NNL5 157 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
CASC3-208ENST00000583649 GPR183P32249 361 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 MAS1LP35410 378 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 POLR2IP36954 125 aaKnown RBP8.1□□□□□ -1.11
CASC3-208ENST00000583649 MRPS15P82914 257 aaKnown RBP8.1□□□□□ -1.11
CASC3-208ENST00000583649 SSX1Q16384 188 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 SMIM19Q96E16 107 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 CENPOQ9BU64 300 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 TMEM59Q9BXS4 323 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 RNF167Q9H6Y7 350 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 SLC2A9Q9NRM0 540 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 SDHAF2Q9NX18 166 aa8.1□□□□□ -1.11
CASC3-208ENST00000583649 MRPS7Q9Y2R9 242 aaKnown RBP8.1□□□□□ -1.11
CASC3-208ENST00000583649 EPM2AB3EWF7 344 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 CD5P06127 495 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 SRMP19623 302 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.11
CASC3-208ENST00000583649 PSMD7P51665 324 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 Q6ZRM9 215 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 CEACAM19Q7Z692 300 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 OR10J5Q8NHC4 309 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 TMEM190Q8WZ59 177 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 FAM210BQ96KR6 192 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 OR2A7Q96R45 310 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 SLC29A1Q99808 456 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 ZNF436Q9C0F3 470 aaPredicted RBP8.09□□□□□ -1.11
CASC3-208ENST00000583649 MED4Q9NPJ6 270 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 C12orf4Q9NQ89 552 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 PRELID3BQ9Y3B1 194 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 S4R3C0 116 aa8.09□□□□□ -1.11
CASC3-208ENST00000583649 PKD1P98161 4303 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 HERC1Q15751 4861 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 IGHV4-28A0A0C4DH34 117 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 HMX3A6NHT5 357 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 CRYGCP07315 174 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 CTSDP07339 412 aaPredicted RBP8.08□□□□□ -1.12
CASC3-208ENST00000583649 SAA1P0DJI8 122 aaPredicted RBP8.08□□□□□ -1.12
CASC3-208ENST00000583649 RPS27AP62979 156 aaKnown RBP8.08□□□□□ -1.12
CASC3-208ENST00000583649 RNF212Q495C1 297 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 Q6ZR54 194 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 STHQ8IWL8 128 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 Q8NAQ8 132 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 OR4A4PQ8NGN8 299 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 URM1Q9BTM9 101 aaKnown RBP8.08□□□□□ -1.12
CASC3-208ENST00000583649 C20orf24Q9BUV8 137 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 OR51E2Q9H255 320 aa8.08□□□□□ -1.12
CASC3-208ENST00000583649 TRAV8-7A0A075B6U6 113 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 IGHV3-35A0A0C4DH35 117 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 TRBV5-5A0A0J9YX44 114 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 TRDCB7Z8K6 153 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 K7EMT4 169 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 NDUFA4O00483 81 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 TGOLN2O43493 480 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 S1PR2O95136 353 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 BPNT1O95861 308 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 MYL12AP19105 171 aa8.07□□□□□ -1.12
CASC3-208ENST00000583649 MAPK3P27361 379 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms