RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TRAF3IP2O43734 574 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 SAP30O75446 220 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 CRTAPO75718 401 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 DHRS3O75911 302 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 HSPB1P04792 205 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ARG1P05089 322 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 HPNP05981 417 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 HCKP08631 526 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 WNT2P09544 360 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 STAG3L3P0CL85 134 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 GIMD1P0DJR0 217 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF728P0DKX0 622 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 OR5H8P0DN80 308 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 NR2C1P13056 603 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST1H1BP16401 226 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 PTGDSP41222 190 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 OR1D4P47884 311 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 RND2P52198 227 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 S100A10P60903 97 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 RND3P61587 244 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 RPS23P62266 143 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 SRPXP78539 464 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 H3F3AP84243 136 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 C1orf61Q13536 156 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF266Q14584 549 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 NUMA1Q14980 2115 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ELOBQ15370 118 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 OR8B8Q15620 311 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 NSDHLQ15738 373 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 UBE2V2Q15819 145 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 C3AR1Q16581 482 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 LINC01620Q4KN68 170 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 KHDC3LQ587J8 217 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 PYY3Q5JQD4 70 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 OR2B11Q5JQS5 317 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 SOHLH1Q5JUK2 328 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF506Q5JVG8 444 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ACER2Q5QJU3 275 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 C10orf128Q5T292 105 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 DCAF12Q5T6F0 453 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 CARD17Q5XLA6 110 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 C2orf16Q68DN1 1984 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 KCNIP4Q6PIL6 250 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 CLEC2AQ6UVW9 174 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 LYZL2Q7Z4W2 148 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 SLC35E3Q7Z769 313 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF100Q8IYN0 542 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM156Q8N614 296 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF565Q8N9K5 539 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 KLHL30-AS1Q8NEE0 82 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 NOXO1Q8NFA2 376 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 OR5AU1Q8NGC0 362 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 TSLPQ969D9 159 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM54Q969K7 222 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 CPNE4Q96A23 557 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 RBMXL1Q96E39 390 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 GNPNAT1Q96EK6 184 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 TVP23CQ96ET8 276 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 C2orf48Q96LS8 159 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM56Q96MV1 263 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 GPER1Q99527 375 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 SLC25A31Q9H0C2 315 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 METTL9Q9H1A3 318 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 PARLQ9H300 379 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 LIME1Q9H400 295 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 PLEKHF2Q9H8W4 249 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 UFSP2Q9NUQ7 469 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 MED29Q9NX70 200 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 IL36GQ9NZH8 169 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 DOK5Q9P104 306 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ONECUT1Q9UBC0 465 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF391Q9UJN7 358 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 MCTS1Q9ULC4 181 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 RPH3ALQ9UNE2 315 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 PIGLQ9Y2B2 252 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM56-RWDD3S4R434 201 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 TRBV24-1A0A075B6N3 115 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 IGHV4-30-2A0A087WSY4 118 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 TRAV26-1A0A087WT03 109 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 A0A087WZ39 114 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 NSG1A0A0A6YYJ2 146 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 PIGBOS1A0A0B4J2F0 54 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 C17orf51A8MQB3 221 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 TRDCB7Z8K6 153 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 H0YL77 283 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 MKRN2OSH3BPM6 223 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 RER1O15258 196 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 CEACAM4O75871 244 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 VAMP5O95183 116 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 HBE1P02100 147 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 SLC25A6P12236 298 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 MYOGP15173 224 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 CBR1P16152 277 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 AADACP22760 399 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ATP6V0CP27449 155 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 S100A2P29034 98 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 AKR1C3P42330 323 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 GUCA1AP43080 201 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 RPS10P46783 165 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 NPBWR2P48146 333 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms