RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
SENP3-208ENST00000583277 CACNG5Q9UF02 275 aa11.83□□□□□ -0.52
SENP3-208ENST00000583277 HILPDAQ9Y5L2 63 aa11.83□□□□□ -0.52
SENP3-208ENST00000583277 A0A0G2JRQ6 117 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 SMLR1H3BR10 107 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 TIMM23O14925 209 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 PSMB6P28072 239 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 CD1BP29016 333 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 IL15RAQ13261 267 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 HABP2Q14520 560 aaPredicted RBP11.82□□□□□ -0.52
SENP3-208ENST00000583277 SSX2Q16385 188 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 OR4D5Q8NGN0 318 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 RHOVQ96L33 236 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 HYLS1Q96M11 299 aa11.82□□□□□ -0.52
SENP3-208ENST00000583277 BPIFB3P59826 476 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 LRRC37A5PQ49AS3 106 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 NOXA1Q86UR1 476 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 OR1S1Q8NH92 325 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 WDR89Q96FK6 387 aaPredicted RBP11.81□□□□□ -0.52
SENP3-208ENST00000583277 RNF5Q99942 180 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 MS4A7Q9GZW8 240 aaPredicted RBP11.81□□□□□ -0.52
SENP3-208ENST00000583277 TMEM140Q9NV12 185 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 CACFD1Q9UGQ2 172 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 TEX15Q9BXT5 2789 aa11.81□□□□□ -0.52
SENP3-208ENST00000583277 CSPG4Q6UVK1 2322 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 G3V3Q6 166 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 PITX3O75364 302 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 MPC2O95563 127 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 NKX2-1P43699 371 aaPredicted RBP11.8□□□□□ -0.52
SENP3-208ENST00000583277 LGALS7P47929 136 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 EIF2B2P49770 351 aaKnown RBP11.8□□□□□ -0.52
SENP3-208ENST00000583277 S100A10P60903 97 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 THAP6Q8TBB0 222 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 CFHR4Q92496 578 aa11.8□□□□□ -0.52
SENP3-208ENST00000583277 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.8□□□□□ -0.52
SENP3-208ENST00000583277 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 FAM90A26D6RGX4 464 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 ST8SIA3O43173 380 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 VENTXO95231 258 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 SCGB1D2O95969 90 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 IGHV4-38-2P0DP08 117 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 RPS16P62249 146 aaKnown RBP11.79□□□□□ -0.52
SENP3-208ENST00000583277 RAB32Q13637 225 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 OR4A47Q6IF82 309 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 SSX9Q7RTT3 188 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 TSNAXQ99598 290 aaKnown RBP11.79□□□□□ -0.52
SENP3-208ENST00000583277 BET1LQ9NYM9 111 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 POMT1Q9Y6A1 747 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 TLN2Q9Y4G6 2542 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 CELSR1Q9NYQ6 3014 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
SENP3-208ENST00000583277 SNAPC5O75971 98 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 MBPP02686 304 aaPredicted RBP11.79□□□□□ -0.52
SENP3-208ENST00000583277 RLN2P04090 185 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 SLC25A4P12235 298 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 BRS3P32247 399 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 IZUMO4Q1ZYL8 232 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 Q5BKY6 102 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 C11orf87Q6NUJ2 197 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 Q6ZRM9 215 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 FOXRED2Q8IWF2 684 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 VKORC1L1Q8N0U8 176 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 OR4A5Q8NH83 315 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 AJUBAQ96IF1 538 aa11.79□□□□□ -0.52
SENP3-208ENST00000583277 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 SRRM4A7MD48 611 aaKnown RBP11.78□□□□□ -0.52
SENP3-208ENST00000583277 K7EPK0 472 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 WRBO00258 174 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 SMAD7O15105 426 aaKnown RBP11.78□□□□□ -0.52
SENP3-208ENST00000583277 SPDEFO95238 335 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 MOSP00540 346 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 AVPP01185 164 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 SAA1P0DJI8 122 aaPredicted RBP11.78□□□□□ -0.52
SENP3-208ENST00000583277 UBE2KP61086 200 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 AARDQ4LEZ3 155 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 PRSS54Q6PEW0 395 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 DYNAPQ8N1N2 210 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 CIARTQ8N365 385 aaPredicted RBP11.78□□□□□ -0.52
SENP3-208ENST00000583277 FAM71E2Q8N5Q1 922 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 C17orf50Q8WW18 174 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 MBD2Q9UBB5 411 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 MAST4O15021 2626 aa11.78□□□□□ -0.52
SENP3-208ENST00000583277 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 HMSDA8MTL9 139 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 MED6O75586 246 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 DEDDO75618 318 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 KBTBD11O94819 623 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 IGKV1D-33P01593 117 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 IGKV1-33P01594 117 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 FGF2P09038 288 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 OR9G9P0C7N8 305 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 PVALBP20472 110 aaPredicted RBP11.77□□□□□ -0.53
SENP3-208ENST00000583277 ID3Q02535 119 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms