RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 VPREB3Q9UKI3 123 aa9.46□□□□□ -0.9
SNORD3C-201ENST00000580533 TCF19Q9Y242 345 aa9.46□□□□□ -0.9
SNORD3C-201ENST00000580533 VSIG4Q9Y279 399 aa9.46□□□□□ -0.9
SNORD3C-201ENST00000580533 ZANQ9Y493 2812 aa9.46□□□□□ -0.9
SNORD3C-201ENST00000580533 NAV3Q8IVL0 2385 aa9.46□□□□□ -0.9
SNORD3C-201ENST00000580533 CELSR1Q9NYQ6 3014 aa9.46□□□□□ -0.9
SNORD3C-201ENST00000580533 CRYM-AS1A6NIL9 109 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 FAM90A9PA6NNJ1 464 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 HMSDA8MTL9 139 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 SHOXO15266 292 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 HPRT1P00492 218 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 PI3P19957 117 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 HTR2BP41595 481 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 RPS16P62249 146 aaKnown RBP9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 EBI3Q14213 229 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 DIAPH2-AS1Q14236 149 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 VMA21Q3ZAQ7 101 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 C4orf46Q504U0 113 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 LDLRAD2Q5SZI1 272 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 SLC25A42Q86VD7 318 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 DYNAPQ8N1N2 210 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 DDB2Q92466 427 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 RTBDNQ9BSG5 229 aaPredicted RBP9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 PLEKHA2Q9HB19 425 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 U3KQ87 197 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 TLN2Q9Y4G6 2542 aa9.45□□□□□ -0.9
SNORD3C-201ENST00000580533 IGHV3-72A0A0B4J1Y9 119 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 LINC00473A8K010 186 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 TRIM77I1YAP6 450 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 HOXA3O43365 443 aaPredicted RBP9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 OR2F2O95006 317 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 CRYZL1O95825 349 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 NQO2P16083 231 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 VAMP1P23763 118 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 HILS1P60008 231 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 SRSF4Q08170 494 aaKnown RBP9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 PLGLAQ15195 96 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 MMDQ15546 238 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 TUSC1Q2TAM9 212 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 TMEM177Q53S58 311 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 ZNF680Q8NEM1 530 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 COQ8AQ8NI60 647 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 MRGPRFQ96AM1 343 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 GALNT14Q96FL9 552 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 C5orf30Q96GV9 206 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 HARBI1Q96MB7 349 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 MOB4Q9Y3A3 225 aa9.44□□□□□ -0.9
SNORD3C-201ENST00000580533 MDFIC2A0A1B0GVS7 189 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 LINC00862A6NCI5 91 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 FGF16O43320 207 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 PROP1O75360 226 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 IFNA7P01567 189 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 IGHV4-59P01825 116 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 HLA-AP01891 365 aaKnown RBP9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 CRYBA1P05813 215 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 OR2B11Q5JQS5 317 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 ZNF695Q8IW36 515 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 RNASE11Q8TAA1 199 aaKnown RBP9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 IL22RA2Q969J5 263 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 EAF1Q96JC9 268 aaPredicted RBP9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 ZNF48Q96MX3 618 aaPredicted RBP9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 RBM14Q96PK6 669 aaKnown RBP9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 RASL11BQ9BPW5 248 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 SLC25A33Q9BSK2 321 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 TMEM222Q9H0R3 208 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 CACFD1Q9UGQ2 172 aa9.43□□□□□ -0.9
SNORD3C-201ENST00000580533 DUXBA0A1W2PPF3 345 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 A6NDX4 124 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 NCBP2LA6PVI3 153 aaKnown RBP9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 NBR2O15453 112 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 SFT2D2O95562 160 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 RNASE1P07998 156 aaKnown RBP9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 OR4E1P0C645 316 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 HLA-GP17693 338 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 UCP1P25874 307 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 RPL30P62888 115 aaKnown RBP9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 SLC9A3R2Q15599 337 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 FAM219AQ8IW50 185 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 LGI3Q8N145 548 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 C12orf45Q8N5I9 185 aaPredicted RBP9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 ADAD2Q8NCV1 583 aaKnown RBP9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 DMBX1Q8NFW5 382 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 OR52B4Q8NGK2 314 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 OR4A5Q8NH83 315 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 RRNAD1Q96FB5 475 aaKnown RBP9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 PHB2Q99623 299 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 CHIAQ9BZP6 476 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 NPFFR1Q9GZQ6 430 aa9.42□□□□□ -0.9
SNORD3C-201ENST00000580533 TSC22D2O75157 780 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 ACTL6BO94805 426 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 MPC2O95563 127 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 IGKV1-16P04430 117 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 FGF2P09038 288 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 OR5AC1P0C628 307 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 LPAR6P43657 344 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 AKR1C2P52895 323 aa9.41□□□□□ -0.9
SNORD3C-201ENST00000580533 UBE2KP61086 200 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms