RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RAB25P57735 213 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 DHRS2Q13268 280 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 TMEM187Q14656 261 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 MMDQ15546 238 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 C4orf46Q504U0 113 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 NPBQ8NG41 125 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 TSNAXQ99598 290 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 C1RLQ9NZP8 487 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 COMMD9Q9P000 198 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 SPDEFO95238 335 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 HRASP01112 189 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 HLA-AP01891 365 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 NQO2P16083 231 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 UBA52P62987 128 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 OXA1LQ15070 435 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 PSG5Q15238 335 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 TRIM16LQ309B1 348 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 LYG2Q86SG7 212 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 Q8N9W7 124 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 LHFPL5Q8TAF8 219 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 R3HDM4Q96D70 268 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 TMEM56Q96MV1 263 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 MOB4Q9Y3A3 225 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 TMEM56-RWDD3S4R434 201 aa12.67□□□□□ -0.38
CSNK1D-212ENST00000580061 NCBP2LA6PVI3 153 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 RRHO14718 337 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 FGF16O43320 207 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 GPR137BO60478 399 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 IL5P05113 134 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 CRYGBP07316 175 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 UBE2KP61086 200 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 VKORC1L1Q8N0U8 176 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 FAM71E2Q8N5Q1 922 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 OR52B4Q8NGK2 314 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 CASTOR1Q8WTX7 329 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 CHPT1Q8WUD6 406 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 RHOVQ96L33 236 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 RAB18Q9NP72 206 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 KIAA1456Q9P272 454 aa12.66□□□□□ -0.38
CSNK1D-212ENST00000580061 MARCH11A6NNE9 402 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 SLC25A17O43808 307 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 DUS4LO95620 317 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 DHFRP00374 187 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 KRASP01116 189 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 AMY1AP04745 511 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 SAA1P0DJI8 122 aaPredicted RBP12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 G6PCP35575 357 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 ANKRD55Q3KP44 614 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 VMA21Q3ZAQ7 101 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 SSX9Q7RTT3 188 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 LURAP1LQ8IV03 231 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 ZNF695Q8IW36 515 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 SELENOHQ8IZQ5 122 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 LGI3Q8N145 548 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 LRTM2Q8N967 370 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 RBPMSQ93062 196 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 IL22RA2Q969J5 263 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 SEC22CQ9BRL7 303 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 METTL1Q9UBP6 276 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-212ENST00000580061 M0QZK8 103 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 PRAF2O60831 178 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 ERVK-16P61578 105 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 SRPXP78539 464 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 TMEM268Q5VZI3 342 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 OR4A47Q6IF82 309 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 PUSL1Q8N0Z8 303 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 TEX45Q8NA69 505 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 MINDY2Q8NBR6 621 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 VSTM2AQ8TAG5 236 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 ZNF431Q8TF32 576 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 RASL11BQ9BPW5 248 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 TPSG1Q9NRR2 321 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 BET1LQ9NYM9 111 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 SIGLEC9Q9Y336 463 aa12.64□□□□□ -0.39
CSNK1D-212ENST00000580061 FAM181BA6NEQ2 426 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 TRIM77I1YAP6 450 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 ATG12O94817 140 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 OR2A4O95047 310 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 IGKV1-5P01602 117 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 IL6RP08887 468 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 RPL15P61313 204 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 PPP1R27Q86WC6 154 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 CADM3Q8N126 398 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 SLC35G3Q8N808 338 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 COQ8AQ8NI60 647 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 OR2A7Q96R45 310 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 GPN1Q9HCN4 374 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 TMEM140Q9NV12 185 aa12.63□□□□□ -0.39
CSNK1D-212ENST00000580061 PLXNB1O43157 2135 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 A0A0B4J293 547 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms