RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 KCNS1Q96KK3 526 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 C1orf147Q96MC9 270 aaPredicted RBP4.88□□□□□ -1.63
DDX42-210ENST00000579539 CHRDL1Q9BU40 450 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 APOOQ9BUR5 198 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 SFXN3Q9BWM7 321 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 QTRT1Q9BXR0 403 aaKnown RBP4.88□□□□□ -1.63
DDX42-210ENST00000579539 PKIBQ9C010 78 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 ZNF665Q9H7R5 613 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 RAB9BQ9NP90 201 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 NGBQ9NPG2 151 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 SLC7A10Q9NS82 523 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 STARD5Q9NSY2 213 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 ARL2-SNX15V9GYD0 113 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 EVPLQ92817 2033 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 CCDC88CQ9P219 2028 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 TRPM7Q96QT4 1865 aa4.88□□□□□ -1.63
DDX42-210ENST00000579539 NINQ8N4C6 2090 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 MYO10Q9HD67 2058 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 IGKV1D-42A0A075B6H8 117 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 A0A0A6YYD4 124 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 A0A1W2PS18 150 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 TIMM23O14925 209 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 NUPR1O60356 82 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 HAND1O96004 215 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 CGAP01215 116 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 AREGP15514 252 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 OMGP23515 440 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 GPR6P46095 362 aaPredicted RBP4.87□□□□□ -1.63
DDX42-210ENST00000579539 AMTP48728 403 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 OR1D5P58170 312 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 PLP1P60201 277 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 CKS1BP61024 79 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 GRB2P62993 217 aaKnown RBP4.87□□□□□ -1.63
DDX42-210ENST00000579539 CCL7P80098 99 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 RUNX1Q01196 453 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 GAGE2BQ13066 116 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 VGLL4Q14135 290 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 EXOSC7Q15024 291 aaKnown RBP4.87□□□□□ -1.63
DDX42-210ENST00000579539 HNRNPA1L2Q32P51 320 aaKnown RBP4.87□□□□□ -1.63
DDX42-210ENST00000579539 GAGE2EQ4V326 116 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 NMSQ5H8A3 153 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 FAM78AQ5JUQ0 283 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 BVES-AS1Q5T3Y7 98 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 GAGE2AQ6NT46 116 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 ZNF547Q8IVP9 402 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 C5orf17Q8NAS9 161 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 ZNF439Q8NDP4 499 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 OR8B3Q8NGG8 313 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 OR4F5Q8NH21 305 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 RND1Q92730 232 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 TAF15Q92804 592 aaKnown RBP eCLIP4.87□□□□□ -1.63
DDX42-210ENST00000579539 NUS1Q96E22 293 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 MRAP2Q96G30 205 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 OR8B2Q96RD0 313 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 TIMM29Q9BSF4 260 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 COMMD5Q9GZQ3 224 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 CLEC5AQ9NY25 188 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 GAGE2DQ9UEU5 116 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 RABAC1Q9UI14 185 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 MMP17Q9ULZ9 603 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 PLXNB2O15031 1838 aa4.87□□□□□ -1.63
DDX42-210ENST00000579539 BRWD3Q6RI45 1802 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 IGKV1-8A0A0C4DH67 115 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 A0A0G2JMM0 328 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 A0A1W2PP11 408 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 A0A1W2PPB8 328 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 PSMB11A5LHX3 300 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 KIR3DP1A8MWS1 328 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 C9JCJ5 164 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 C11orf94C9JXX5 98 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 F8W1H4 67 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 H0Y980 276 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 SSSCA1O60232 199 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 ZIC3O60481 467 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 MPDU1O75352 247 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 RHBDL1O75783 438 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 CST7O76096 145 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 TTRP02766 147 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 C3orf79P0CE67 100 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 SP9P0CG40 484 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 CEBPBP17676 345 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 PGCP20142 388 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 MDKP21741 143 aaPredicted RBP4.86□□□□□ -1.63
DDX42-210ENST00000579539 ACP1P24666 158 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 FKBP2P26885 142 aaKnown RBP4.86□□□□□ -1.63
DDX42-210ENST00000579539 CD70P32970 193 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 TIMP3P35625 211 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 EMDP50402 254 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 CX3CL1P78423 397 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 SSBP2P81877 361 aaPredicted RBP4.86□□□□□ -1.63
DDX42-210ENST00000579539 PSG9Q00887 426 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 HSD52Q0P140 79 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 KLF5Q13887 457 aaPredicted RBP4.86□□□□□ -1.63
DDX42-210ENST00000579539 KIR2DS3Q14952 304 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 KISS1Q15726 138 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 RPEL1Q2QD12 228 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 SP6Q3SY56 376 aa4.86□□□□□ -1.63
DDX42-210ENST00000579539 ZNF324BQ6AW86 544 aaPredicted RBP4.86□□□□□ -1.63
DDX42-210ENST00000579539 UFSP1Q6NVU6 142 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms