RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 RTN4RQ9BZR6 473 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 AHCTF1Q8WYP5 2266 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 TDRD6O60522 2096 aaKnown RBP8.82□□□□□ -1
PTPRM-205ENST00000577827 TP53BP1Q12888 1972 aaPredicted RBP8.82□□□□□ -1
PTPRM-205ENST00000577827 RHBDL1O75783 438 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 LINC00271P0C7V0 271 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 RTP5Q14D33 572 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 PMCHL2Q9BQD1 86 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 PTPRDP23468 1912 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 PROB1E7EW31 1015 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 IFNL4K9M1U5 179 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 M0R296 226 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 OR4A8P0C604 315 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 MST1LQ2TV78 715 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 PYY3Q5JQD4 70 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 GBGT1Q8N5D6 347 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 RASL11BQ9BPW5 248 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 ZNF430Q9H8G1 570 aaPredicted RBP8.82□□□□□ -1
PTPRM-205ENST00000577827 CXCL1P09341 107 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 CEACAM3P40198 252 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 WNT5AP41221 380 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 ZNF146Q15072 292 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 DEFB109BQ30KR1 87 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 ASCL5Q7RTU5 278 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 WFIKKN1Q96NZ8 548 aa8.82□□□□□ -1
PTPRM-205ENST00000577827 GAGE10A6NGK3 116 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 TMPRSS2O15393 492 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 ZNF207O43670 478 aaKnown RBP8.81□□□□□ -1
PTPRM-205ENST00000577827 CENPWQ5EE01 88 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 DOLPP1Q86YN1 238 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 TPRX1Q8N7U7 411 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 STPG3Q8N7X2 389 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 NABP2Q9BQ15 211 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 TMEM106BQ9NUM4 274 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 TPRP12270 2363 aaKnown RBP8.81□□□□□ -1
PTPRM-205ENST00000577827 S100A4P26447 101 aaKnown RBP8.81□□□□□ -1
PTPRM-205ENST00000577827 MAS1LP35410 378 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 NUBP1P53384 320 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 GP6Q9HCN6 339 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 VWA8A3KMH1 1905 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 BTF3P20290 206 aaKnown RBP8.81□□□□□ -1
PTPRM-205ENST00000577827 SOX8P57073 446 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 P2RY6Q15077 328 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 FAM214BQ7L5A3 538 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 HLA-DRB1P01911 266 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 ACSF3Q4G176 576 aaPredicted RBP8.81□□□□□ -1
PTPRM-205ENST00000577827 ASCL3Q9NQ33 180 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 HIGD1AQ9Y241 93 aa8.81□□□□□ -1
PTPRM-205ENST00000577827 PRR19A6NJB7 356 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 MKRN2OSH3BPM6 223 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 ZIC3O60481 467 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 AMBPP02760 352 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 EGR1P18146 543 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 MC5RP33032 325 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 RPL8P62917 257 aaKnown RBP8.8□□□□□ -1
PTPRM-205ENST00000577827 SLC25A33Q9BSK2 321 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 IGKV1D-13A0A0B4J2D9 117 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 CA2P00918 260 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 IGKV1-13P0DP09 117 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 CALYQ9NYX4 217 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 TBL2Q9Y4P3 447 aaKnown RBP8.8□□□□□ -1
PTPRM-205ENST00000577827 IL6RP08887 468 aaPredicted RBP8.8□□□□□ -1
PTPRM-205ENST00000577827 STAG3L2P0CL84 134 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 SMIM17P0DL12 118 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 GPX4P36969 197 aaPredicted RBP8.8□□□□□ -1
PTPRM-205ENST00000577827 COMPP49747 757 aaPredicted RBP8.8□□□□□ -1
PTPRM-205ENST00000577827 ZNF137PP52743 207 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
PTPRM-205ENST00000577827 KIAA1644Q3SXP7 199 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 TMEM116Q8NCL8 245 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 C2orf88Q9BSF0 95 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 SCNM1Q9BWG6 230 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 FOXJ2Q9P0K8 574 aa8.8□□□□□ -1
PTPRM-205ENST00000577827 CIDEAO60543 219 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 ERVFRD-1P60508 538 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 FXYD3Q14802 87 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 STPG1Q5TH74 334 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 SSX8Q7RTT4 187 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 OR8A1Q8NGG7 326 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 CCL17Q92583 94 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 MRPS18CQ9Y3D5 142 aaKnown RBP8.79□□□□□ -1
PTPRM-205ENST00000577827 CASP8AP2Q9UKL3 1982 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 A0A1W2PPE3 182 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 A0A1W2PQM1 296 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 C12orf77C9JDV5 145 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 AGFG2O95081 481 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 CRYGSP22914 178 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 MRPL52Q86TS9 123 aaKnown RBP8.79□□□□□ -1
PTPRM-205ENST00000577827 ABHD12Q8N2K0 398 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 SCN8AQ9UQD0 1980 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 GNG7O60262 68 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 LIPFP07098 398 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 TFF3Q07654 80 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 PMS2CLQ68D20 193 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 DHRS13Q6UX07 377 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 SNRNP40Q96DI7 357 aaKnown RBP8.79□□□□□ -1
PTPRM-205ENST00000577827 ANAPC10Q9UM13 185 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 PGPA6NDG6 321 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms