RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 ADMP35318 185 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 NFAM1Q8NET5 270 aaPredicted RBP11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR1L8Q8NGR8 309 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 CHRNA10Q9GZZ6 450 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 SCO2A0A1W2PP80 73 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 CIDEAO60543 219 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR4A8P0C604 315 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 GZMBP10144 247 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 BTF3P20290 206 aaKnown RBP11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 TFPI2P48307 235 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 CEBPDP49716 269 aaPredicted RBP11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 LGALS4P56470 323 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 RELBQ01201 579 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 C5orf17Q8NAS9 161 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR8B2Q96RD0 313 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 GAL3ST2Q9H3Q3 398 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 TNFRSF1AP19438 455 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 HARBI1Q96MB7 349 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 NRN1Q9NPD7 142 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 CDC42EP3Q9UKI2 254 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 CTSSP25774 331 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 COL25A1Q9BXS0 654 aaPredicted RBP11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZFP30Q9Y2G7 519 aa11.16□□□□□ -0.62
PCDHGB3-201ENST00000576222 MDC1Q14676 2089 aaKnown RBP11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 SNRNP200O75643 2136 aaKnown RBP11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 TRAV9-1A0A075B6T8 112 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 NDUFB3O43676 98 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZIC3O60481 467 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 NAPSAO96009 420 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 PRDX2P32119 198 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 PLP1P60201 277 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 PTPRZ1P23471 2315 aaPredicted RBP11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 LINC00869P0C866 280 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 PLAURQ03405 335 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZNF826PQ6ZT77 177 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 TMEM171Q8WVE6 324 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 ALKBH7Q9BT30 221 aaPredicted RBP11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 GNB4Q9HAV0 340 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 SOX8P57073 446 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 TCTAP57738 103 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 LRRC10Q5BKY1 277 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 FAM19A2Q8N3H0 131 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 STPG3Q8N7X2 389 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 ST6GALNAC3Q8NDV1 305 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 TMEM140Q9NV12 185 aa11.15□□□□□ -0.62
PCDHGB3-201ENST00000576222 TMEM265A0A087WTH1 108 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 TNFSF13O75888 250 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 KLF3P57682 345 aaPredicted RBP11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 HSPE1P61604 102 aaKnown RBP11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 ZADH2Q8N4Q0 377 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 HLA-DRB1P01911 266 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 VWA8A3KMH1 1905 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 A8MWP6 167 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 SCGB1C2P0DMR2 95 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 COX5BP10606 129 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 NMUP48645 174 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 TNFAIP6P98066 277 aaPredicted RBP11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 MOGAT3Q86VF5 341 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 OR2M7Q8NG81 312 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 NABP2Q9BQ15 211 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 PLXNA3P51805 1871 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 PRDM13Q9H4Q3 707 aa11.14□□□□□ -0.63
PCDHGB3-201ENST00000576222 RRHO14718 337 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 MGST3O14880 152 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 COMPP49747 757 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 WFDC8Q8IUA0 241 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 CT55Q8WUE5 264 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 IGHV1-45A0A0A0MS14 117 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 NUDT3O95989 172 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 CD55P08174 381 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 GATAD1Q8WUU5 269 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 FSCN3Q9NQT6 498 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 TNFSF15O95150 251 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 TNXAQ16473 311 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 SLC25A53Q5H9E4 307 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 ZNF324BQ6AW86 544 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 SPSB3Q6PJ21 355 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 OR5P3Q8WZ94 311 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 CLDN16Q9Y5I7 305 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 PGPA6NDG6 321 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 PGPEP1LA6NFU8 196 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 AGFG2O95081 481 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 IL6RP08887 468 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 FABP2P12104 132 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 INO80CQ6PI98 192 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 KCNS1Q96KK3 526 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 SFXN3Q9BWM7 321 aa11.13□□□□□ -0.63
PCDHGB3-201ENST00000576222 EREGO14944 169 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 MMDQ15546 238 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 RND1Q92730 232 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 IGHV3OR15-7A0A075B7D8 119 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms