RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 EXTL2Q9UBQ6 330 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 ADAM30Q9UKF2 790 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 PRB2P02812 416 aaPredicted RBP11.9□□□□□ -0.5
SMG6-220ENST00000576218 TRGV3P03979 118 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 SAA1P0DJI8 122 aaPredicted RBP11.9□□□□□ -0.5
SMG6-220ENST00000576218 HRH1P35367 487 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 AADACL3Q5VUY0 350 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 REC114Q7Z4M0 266 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 ZNF491Q8N8L2 437 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 OR11H1Q8NG94 326 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 VSTM2AQ8TAG5 236 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 GIMAP1Q8WWP7 306 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.5
SMG6-220ENST00000576218 SRRM4A7MD48 611 aaKnown RBP11.89□□□□□ -0.51
SMG6-220ENST00000576218 ARPC1BO15143 372 aaKnown RBP11.89□□□□□ -0.51
SMG6-220ENST00000576218 HRASP01112 189 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 OR8U8P0C7N1 319 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 APELAP0DMC3 54 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 S100GP29377 79 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 RCVRNP35243 200 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 RPL5P46777 297 aaKnown RBP11.89□□□□□ -0.51
SMG6-220ENST00000576218 RPL30P62888 115 aaKnown RBP11.89□□□□□ -0.51
SMG6-220ENST00000576218 DYRK1AQ13627 763 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 MSMO1Q15800 293 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 PRSS8Q16651 343 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 FOXB2Q5VYV0 432 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 OR5T1Q8NG75 326 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 OR1N2Q8NGR9 330 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 OR6F1Q8NGZ6 308 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 OR51H1Q8NH63 302 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 C15orf40Q8WUR7 153 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 GPHA2Q96T91 129 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 P2RX4Q99571 388 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 GNB4Q9HAV0 340 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 COA4Q9NYJ1 87 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 SCOCQ9UIL1 159 aa11.89□□□□□ -0.51
SMG6-220ENST00000576218 C13orf42A0A1B0GVH6 325 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 CCDC160A6NGH7 325 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 SULT1C2O00338 296 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 SOX15O60248 233 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 IGHV3-11P01762 117 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 CRYGBP07316 175 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
SMG6-220ENST00000576218 TMBIM6P55061 237 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 ZNF616Q08AN1 781 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 SPCS2Q15005 226 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
SMG6-220ENST00000576218 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 MMD2Q8IY49 270 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 CMTM1Q8IZ96 169 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 VKORC1L1Q8N0U8 176 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 GPX8Q8TED1 209 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 AIFM2Q9BRQ8 373 aa11.88□□□□□ -0.51
SMG6-220ENST00000576218 DPPA5A6NC42 116 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 MSGN1A6NI15 193 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 OR2A4O95047 310 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 IFNA6P05013 189 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
SMG6-220ENST00000576218 MRAPQ8TCY5 172 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 MYOZ3Q8TDC0 251 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 SRSF12Q8WXF0 261 aaKnown RBP11.87□□□□□ -0.51
SMG6-220ENST00000576218 MOB3AQ96BX8 217 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 OR2A7Q96R45 310 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 BCL7BQ9BQE9 202 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
SMG6-220ENST00000576218 HRASLSQ9HDD0 168 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 ANAPC10Q9UM13 185 aa11.87□□□□□ -0.51
SMG6-220ENST00000576218 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 H3BUA1 57 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 KBTBD11O94819 623 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 RLN1P04808 185 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
SMG6-220ENST00000576218 NAT1P18440 290 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 ERVK-16P61578 105 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 C19orf54Q5BKX5 351 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 DMBX1Q8NFW5 382 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 RHOVQ96L33 236 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 SPIN2AQ99865 258 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 SPIN2BQ9BPZ2 258 aa11.86□□□□□ -0.51
SMG6-220ENST00000576218 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
SMG6-220ENST00000576218 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
SMG6-220ENST00000576218 ZMAT5Q9UDW3 170 aaKnown RBP11.86□□□□□ -0.51
SMG6-220ENST00000576218 SEC14L6B5MCN3 397 aa11.85□□□□□ -0.51
SMG6-220ENST00000576218 LINC01619G3V211 115 aa11.85□□□□□ -0.51
SMG6-220ENST00000576218 I3L521 148 aa11.85□□□□□ -0.51
SMG6-220ENST00000576218 EIF4EBP1Q13541 118 aaPredicted RBP11.85□□□□□ -0.51
SMG6-220ENST00000576218 RNASE10Q5GAN6 216 aaKnown RBP11.85□□□□□ -0.51
SMG6-220ENST00000576218 LPCAT3Q6P1A2 487 aa11.85□□□□□ -0.51
SMG6-220ENST00000576218 DHRS11Q6UWP2 260 aa11.85□□□□□ -0.51
SMG6-220ENST00000576218 LAX1Q8IWV1 398 aa11.85□□□□□ -0.51
SMG6-220ENST00000576218 FCAMRQ8WWV6 532 aa11.85□□□□□ -0.51
SMG6-220ENST00000576218 FYTTD1Q96QD9 318 aaKnown RBP11.85□□□□□ -0.51
SMG6-220ENST00000576218 FXYD6Q9H0Q3 95 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms