RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 SPATA31B1PQ5VZV4 182 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 H2BFWTQ7Z2G1 175 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 NHLRC2Q8NBF2 726 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 HINT2Q9BX68 163 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 CHRNA10Q9GZZ6 450 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 GCM1Q9NP62 436 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 RPH3ALQ9UNE2 315 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 TIMM8BQ9Y5J9 83 aaPredicted RBP12.19□□□□□ -0.46
SCARF1-209ENST00000576012 CA1P00915 261 aaPredicted RBP12.19□□□□□ -0.46
SCARF1-209ENST00000576012 TIMP3P35625 211 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
SCARF1-209ENST00000576012 HIPK2Q9H2X6 1198 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 C12orf49Q9H741 205 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 BOD1L1Q8NFC6 3051 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 ZNF318Q5VUA4 2279 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 ANKRD30BLA7E2S9 258 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 ZNF253O75346 499 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 OR2H2O95918 312 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 RPL31P62899 125 aaKnown RBP12.19□□□□□ -0.46
SCARF1-209ENST00000576012 PCOLCEQ15113 449 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 TMEM144Q7Z5S9 345 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 SAXO1Q8IYX7 474 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 CLUHP3Q96NS8 147 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
SCARF1-209ENST00000576012 RNASE7Q9H1E1 156 aaKnown RBP12.19□□□□□ -0.46
SCARF1-209ENST00000576012 WIPI2Q9Y4P8 454 aa12.19□□□□□ -0.46
SCARF1-209ENST00000576012 IGLV3-12A0A075B6K2 115 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 CBY3A6NI87 242 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 J3QW42 95 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 MLNRO43193 412 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 FOXH1O75593 365 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 AESQ08117 197 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 PSG7Q13046 419 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 TEX43Q6ZNM6 134 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 TUSC5Q8IXB3 177 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 NRN1Q9NPD7 142 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 ZNF586Q9NXT0 402 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 ZFP30Q9Y2G7 519 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 LRRC30A6NM36 301 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 YPEL1O60688 119 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 NXPH2O95156 264 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 NDUFB8O95169 186 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 VENTXO95231 258 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 LINC00614P0C842 121 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 MRGPRDQ8TDS7 321 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 YPEL2Q96QA6 119 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 C1QTNF5Q9BXJ0 243 aa12.18□□□□□ -0.46
SCARF1-209ENST00000576012 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
SCARF1-209ENST00000576012 K7EN84 100 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 P04436 131 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 ABHD12Q8N2K0 398 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 RNF138Q8WVD3 245 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 MGST1P10620 155 aaKnown RBP12.17□□□□□ -0.46
SCARF1-209ENST00000576012 CCL4P13236 92 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 RNPS1Q15287 305 aaKnown RBP12.17□□□□□ -0.46
SCARF1-209ENST00000576012 LPAL2Q16609 132 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 UBE2ZQ9H832 354 aaPredicted RBP12.17□□□□□ -0.46
SCARF1-209ENST00000576012 HEYLQ9NQ87 328 aaPredicted RBP12.17□□□□□ -0.46
SCARF1-209ENST00000576012 YTHDF2Q9Y5A9 579 aaKnown RBP12.17□□□□□ -0.46
SCARF1-209ENST00000576012 CNOT1A5YKK6 2376 aaKnown RBP12.17□□□□□ -0.46
SCARF1-209ENST00000576012 ABCA1O95477 2261 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 IGHV5-10-1A0A0J9YXX1 117 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 CD1BP29016 333 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 VHLLQ6RSH7 139 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 ZNF826PQ6ZT77 177 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 DCTN5Q9BTE1 182 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
SCARF1-209ENST00000576012 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 WNT9BO14905 357 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 COMPP49747 757 aaPredicted RBP12.16□□□□□ -0.46
SCARF1-209ENST00000576012 GAGE1Q13065 139 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 GGNQ86UU5 652 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
SCARF1-209ENST00000576012 LAMTOR2Q9Y2Q5 125 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 C17orf112F2Z3M2 114 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 M0QZ24 198 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 DKK1O94907 266 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 CELA3AP09093 270 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 SRIP30626 198 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 GABRA2P47869 451 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 RANP62826 216 aaKnown RBP12.16□□□□□ -0.46
SCARF1-209ENST00000576012 Q5PR19 223 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 TECTBQ96PL2 329 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 ARFGEF3Q5TH69 2177 aa12.16□□□□□ -0.46
SCARF1-209ENST00000576012 PDE6DO43924 150 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 HYPMO75409 117 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 PAFAH1B2P68402 229 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 FOXL1Q12952 345 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 ALKBH6Q3KRA9 238 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 Q56UQ5 140 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 WDR74Q6RFH5 385 aaPredicted RBP12.15□□□□□ -0.46
SCARF1-209ENST00000576012 C5orf30Q96GV9 206 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 SSBP3Q9BWW4 388 aaPredicted RBP12.15□□□□□ -0.46
SCARF1-209ENST00000576012 SEPSECSQ9HD40 501 aaKnown RBP12.15□□□□□ -0.46
SCARF1-209ENST00000576012 PSG11Q9UQ72 335 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 RELBQ01201 579 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 SPINK14Q6IE38 97 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 HSPB7Q9UBY9 170 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms