RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	RPS16	P62249	146 aa	Known RBP	11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	SSBP2	P81877	361 aa	Predicted RBP	11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	VAX1	Q5SQQ9	334 aa		11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	OVCH2	Q7RTZ1	564 aa		11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	C4orf3	Q8WVX3	66 aa		11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	RNF5	Q99942	180 aa		11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	OR2D2	Q9H210	308 aa		11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	METTL1	Q9UBP6	276 aa	Known RBP	11.01	□□□□□ -0.65
EDC4-210	ENST00000575507	ANKRD20A5P	A0PJZ0	165 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	SRRM4	A7MD48	611 aa	Known RBP	11	□□□□□ -0.65
EDC4-210	ENST00000575507		J3QRK9	145 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	ARPC1B	O15143	372 aa	Known RBP	11	□□□□□ -0.65
EDC4-210	ENST00000575507	CD74	P04233	296 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	FCER2	P06734	321 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	CRYGB	P07316	175 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	AKAIN1	P0CW23	69 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	OR5H8	P0DN80	308 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	HRH1	P35367	487 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	INPP1	P49441	399 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	RAB25	P57735	213 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	GNB1	P62873	340 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	PJVK	Q0ZLH3	352 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	DYRK1A	Q13627	763 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	FHL3	Q13643	280 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	MEF2D	Q14814	521 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	BAK1	Q16611	211 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	ECSCR	Q19T08	205 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	MRGPRG-AS1	Q2M3A8	158 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	STEAP1B	Q6NZ63	245 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	TOMM5	Q8N4H5	51 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11	□□□□□ -0.65
EDC4-210	ENST00000575507	OR11H1	Q8NG94	326 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	UBE2E2	Q96LR5	201 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	ALX4	Q9H161	411 aa	Predicted RBP	11	□□□□□ -0.65
EDC4-210	ENST00000575507	SLC35D1	Q9NTN3	355 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507	EHF	Q9NZC4	300 aa		11	□□□□□ -0.65
EDC4-210	ENST00000575507		A0A1W2PN81	502 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	RAB3D	O95716	219 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	CA2	P00918	260 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	PMP2	P02689	132 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	CD3D	P04234	171 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	IFNA6	P05013	189 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	IL7	P13232	177 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	FAU	P35544	74 aa	Known RBP	10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	CHRNA7	P36544	502 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	RFX2	P48378	723 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	LUM	P51884	338 aa	Predicted RBP	10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	KLF9	Q13886	244 aa	Predicted RBP	10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	PLGLA	Q15195	96 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	RNASE10	Q5GAN6	216 aa	Known RBP	10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	TMEM65	Q6PI78	240 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	DHRS11	Q6UWP2	260 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	ZNF562	Q6V9R5	426 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	PDPN	Q86YL7	162 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	ARRDC1	Q8N5I2	433 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	BVES	Q8NE79	360 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	LFNG	Q8NES3	379 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	GIMAP1	Q8WWP7	306 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	FLYWCH2	Q96CP2	140 aa	Known RBP	10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	NOTCH3	Q9UM47	2321 aa		10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	PRKDC	P78527	4128 aa	Known RBP	10.99	□□□□□ -0.65
EDC4-210	ENST00000575507	LINC00473	A8K010	186 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	SLC25A17	O43808	307 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	TUSC2	O75896	110 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	NFYA	P23511	347 aa	Predicted RBP	10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	TSPAN5	P62079	268 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	ZNF57	Q68EA5	555 aa	Predicted RBP	10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	PPP1R27	Q86WC6	154 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	TMEM17	Q86X19	198 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	DDB2	Q92466	427 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	MCRIP2	Q9BUT9	160 aa	Known RBP	10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	VSIG4	Q9Y279	399 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	OR2W1	Q9Y3N9	320 aa		10.98	□□□□□ -0.65
EDC4-210	ENST00000575507	DISC1	C4P0D8	188 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	UPK1B	O75841	260 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	IGLV2-14	P01704	120 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	FCGR2C	P31995	323 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	DUT	P33316	252 aa	Known RBP	10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	RUNX1	Q01196	453 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	FXYD3	Q14802	87 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	TMEM177	Q53S58	311 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	DEFB121	Q5J5C9	76 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	UNQ5815/PRO19632	Q6UWF5	114 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	OR1N2	Q8NGR9	330 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	OR6F1	Q8NGZ6	308 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	MS4A10	Q96PG2	267 aa		10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	TSNAX	Q99598	290 aa	Known RBP	10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	C7orf50	Q9BRJ6	194 aa	Known RBP	10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	FOXA2	Q9Y261	457 aa	Predicted RBP	10.97	□□□□□ -0.65
EDC4-210	ENST00000575507	IGKV1D-13	A0A0B4J2D9	117 aa		10.96	□□□□□ -0.65
EDC4-210	ENST00000575507	NAP1L6	A6NFF2	107 aa		10.96	□□□□□ -0.65
EDC4-210	ENST00000575507	CENPX	A8MT69	81 aa		10.96	□□□□□ -0.65
EDC4-210	ENST00000575507		M0QYG6	137 aa		10.96	□□□□□ -0.65
EDC4-210	ENST00000575507	SPDEF	O95238	335 aa		10.96	□□□□□ -0.65
EDC4-210	ENST00000575507	PPY	P01298	95 aa		10.96	□□□□□ -0.65
EDC4-210	ENST00000575507	APOA2	P02652	100 aa		10.96	□□□□□ -0.65
EDC4-210	ENST00000575507	IGKV1-13	P0DP09	117 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms