RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 SH3BGRL3Q9H299 93 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 SRMSQ9H3Y6 488 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 EDA2RQ9HAV5 297 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 HEBP1Q9NRV9 189 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 LYRM2Q9NU23 88 aaPredicted RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 RBM12B-AS1Q9P1G2 102 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 RSL24D1Q9UHA3 163 aaKnown RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 UGT2A1Q9Y4X1 527 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 RFNGQ9Y644 331 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 GON4LQ3T8J9 2241 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 SCN10AQ9Y5Y9 1956 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 DICER1Q9UPY3 1922 aaKnown RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 IGLV3-10A0A075B6K4 115 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 WI2-2373I1.2A0A1W2PRP0 233 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 OR5H14A6NHG9 310 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 A8MU10 97 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 INMT-MINDY4F8WBC2 141 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 G3V2T6 193 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 FFAR1O14842 300 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 MYL12BO14950 172 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 HCRTO43612 131 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 PIAS1O75925 651 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 CDRT1O95170 752 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 GADD45GO95257 159 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 IGLV3-25P01717 112 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 TRBV12-3P01733 135 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 IGHMP01871 453 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 C1QAP02745 245 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 MPC1LP0DKB6 136 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 LAMP1P11279 417 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 CTLA4P16410 223 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 SPI1P17947 270 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 ZBTB25P24278 435 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 DDTP30046 118 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 IL2RGP31785 369 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 SLC25A1P53007 311 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 NDUFV3P56181 108 aaKnown RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 CTBP2P56545 445 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 DEFA1P59665 94 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 GNG2P59768 71 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 RPL26P61254 145 aaKnown RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 RPS24P62847 133 aaKnown RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 CRADDP78560 199 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 EMX2Q04743 252 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 BAMBIQ13145 260 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 HERPUD1Q15011 391 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 ZNF146Q15072 292 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 RGNQ15493 299 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 OR8B8Q15620 311 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 BATFQ16520 125 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 C15orf32Q32M92 178 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 Q499Y3 187 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 SCGB1D4Q6XE38 83 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 TEX43Q6ZNM6 134 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 DNM1P46Q6ZS02 220 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 LINC00173Q6ZV60 143 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 TMEM179BQ7Z7N9 219 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 LINC00337Q8N6G1 96 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 OR11H7Q8NGC8 314 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 OR10G6Q8NH81 332 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 ZNF420Q8TAQ5 688 aaPredicted RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 ACOT12Q8WYK0 555 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 PTX4Q96A99 478 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 FXYD5Q96DB9 178 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 SMIM8Q96KF7 97 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 MRPL57Q9BQC6 102 aaKnown RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 HSPB9Q9BQS6 159 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 TMEM126AQ9H061 195 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 TMEM222Q9H0R3 208 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 DEFB127Q9H1M4 99 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 CXCL16Q9H2A7 254 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 Q9H521 79 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 EFCAB1Q9HAE3 211 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 POPDC3Q9HBV1 291 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 HMG20AQ9NP66 347 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 ACER3Q9NUN7 267 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 TMEM216Q9P0N5 145 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 CTSZQ9UBR2 303 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 MARCOQ9UEW3 520 aaPredicted RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 HSPB8Q9UJY1 196 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 RBM7Q9Y580 266 aaKnown RBP2.5□□□□□ -2.01
NUP88-209ENST00000574855 WDR90Q96KV7 1748 aa2.5□□□□□ -2.01
NUP88-209ENST00000574855 SCN4AP35499 1836 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 PRRC2AP48634 2157 aaKnown RBP2.49□□□□□ -2.01
NUP88-209ENST00000574855 LCTP09848 1927 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 ZNFX1Q9P2E3 1918 aaKnown RBP2.49□□□□□ -2.01
NUP88-209ENST00000574855 IGHV4-30-2A0A087WSY4 118 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 TRAV26-2A0A0B4J265 109 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 IGKV1-8A0A0C4DH67 115 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 A0A0G2JN53 185 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 A0A1B0GV50 99 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 C5orf49A4QMS7 147 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 PGPA6NDG6 321 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 SHISA9B4DS77 424 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 PSPHP1O15172 72 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 TPST1O60507 370 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 IGHG2P01859 326 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 HBZP02008 142 aa2.49□□□□□ -2.01
NUP88-209ENST00000574855 CSN2P05814 226 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms